Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph9g0906 ATGGCCGAGAATGTGAGTGGTGAAAAGAGACGGCCGAAGAAATCTGAGAAGAATGAAAAATCTGAGTCGAGATACAAATTTTTCGTAGGAACCACACAGAAGTGCACGGTCTGTGACAAAACCGCCTACCCCGTCGACCGGTTAACCGCTGACGGCCGGGTCTACCATAAGGCTTGCTTCCGATGCCACCATTGTCGGAATACCCTCAAGCTGAGCAACTACTGTTCTTTTGAGGGAGTGCTATACTGCAGACCCCATTATGATCAACTCTACAAGCGAACTGGTAGCCTTGAAAAAAGCTTTGAAGGAACACCCAAGATTCAGAAACCAGAAAAACAAACTGAGAATGAGAATGCTAAGATTCTCTCAAATGTGTTCTTGGGCACCAAAGACAAATGTGCAGGTTGTCAAAAGACAGTTTATCCTACTGAGAGGGTAACAGTTAATGGAACTCCATACCACAAGGGCTGCTTCAAGTGCAGCCATGGAGGCTGCACAATAACCTCAGCCAACTTCATTACACATGAGGGAAAGCTATATTGCAAGCACCATCACATTCAACTTTTCAAAGAGAAAGGCAACTATAGCCAGCTTGAGGGTGATAGAGACAAGAATCCTGCTTTGAAAGTTGGTGCTTAA 639 0.4507 MAENVSGEKRRPKKSEKNEKSESRYKFFVGTTQKCTVCDKTAYPVDRLTADGRVYHKACFRCHHCRNTLKLSNYCSFEGVLYCRPHYDQLYKRTGSLEKSFEGTPKIQKPEKQTENENAKILSNVFLGTKDKCAGCQKTVYPTERVTVNGTPYHKGCFKCSHGGCTITSANFITHEGKLYCKHHHIQLFKEKGNYSQLEGDRDKNPALKVGA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph9g0906 212 FunFam LIM domain and actin-binding 1 127 197 - -
Enph9g0906 212 PANTHER OS06G0237300 PROTEIN 23 118 - -
Enph9g0906 212 ProSitePatterns LIM zinc-binding domain signature. 35 69 IPR001781 -
Enph9g0906 212 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 125 158 - -
Enph9g0906 212 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 26 60 - -
Enph9g0906 212 ProSiteProfiles LIM domain profile. 33 93 IPR001781 -
Enph9g0906 212 ProSiteProfiles LIM domain profile. 131 191 IPR001781 -
Enph9g0906 212 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 159 198 - -
Enph9g0906 212 FunFam LIM domain and actin-binding 1 29 99 - -
Enph9g0906 212 Pfam LIM domain 133 188 IPR001781 -
Enph9g0906 212 Pfam LIM domain 35 89 IPR001781 -
Enph9g0906 212 SMART lim_4 132 184 IPR001781 -
Enph9g0906 212 SMART lim_4 34 86 IPR001781 -
Enph9g0906 212 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 61 101 - -
Enph9g0906 212 Gene3D Cysteine Rich Protein 29 99 - -
Enph9g0906 212 Gene3D Cysteine Rich Protein 128 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph9g0906 Enph-Chr9 13772839 13775374 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Enph9g0906 LIM 3.8e-13 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph9g0906 K09377 - pop:7478747 328.561