Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph9g0641 ATGATGGATTTTGATGAATATGAGTATTTAGAGAAAACAGTTGAAAATCCTGAACTTCAGAGGAAGGAGAAAACTAATGGTAGTGATGGAACTGTAAAACTTGAAGAGAGAGATCACAGCCGGAGTTCAAAGCATAAAGCTAGTGAGAAGCATAATGATGTTGACTGCCATTCCAAGCAATTAAAATTTGGAGATGATTCTTGTGATTATGACAATCACAAAGAAAGAGAGTCATCTCGCCATCGTTCACTGTCCAAAGATGGAGACAAGGAGAAGGATCGGCACAGAAGCATCCAGGACTATAGGGACAGGGTGAGAGATCGGGAAAGAGTCAAGGAGGAGAAGTACAGTAGAGAGAGAGAGAGACAACGGAAACATGACCGTGACCGAGAAAGAGACAAAAGAGACCGGGGAAGTGAGAGTGAAAGAGAAAGGGAGAGGGATCATTCATGGCGAAGCAGAAATATATCTGAAAGGCATCGGAGTGATCTGGATGAAAGAGATAGAGAGAGGAGTCGTGACAGAGATCATAGAGACAGAGAAAGAAGCCGGGACAAGGATTACAAAGACAGAGAAAGGGAGACAGAATCAAGGGAGCGAGATAAAGATAGCAGATTCTGGGAACTCGCAGATATGGTAGAGCGATCTTCAGATGGTCTTTCTGGCAATTGGGCCAGGCACAGAACCTCAGATCATGGGTTTCAGAGTTTCTCCCTTCCGGAACGACATAAAGATAAGAAGGAAGAAGCAGCAGAACCAGAGGTTGACCCTGAACGGGATCAGAGGACTGTGTTTGCTTATCAGATTTCTCTGAAGGCAGATGAAAGAGATGTATATGAGTTCTTTTCAAGGGCTGGCAAGGTGCGAGATGTTCGCCTGATAATGGACCGCAATTCCCGACGATCTAAGGGTGTTGGGTATATTGAATTCTATGATGTCATGTCTGTCCCCATGGCAATAGCACTTTCTGGGCAACCTCTTCTTGGCCAACCTGTGATGGTGAAGCCATCAGAAGCGGAAAAGAATTTGGTTCAATCTACTACATCTGTAGCTAGTGGATCCACTGGACTTATTGGCCCTTATTCTGGGGGAGCAAGACGGCTCTATGTAGGCAATTTGCATTTCAGTATTACTGAAGCTGATCTTCGCAGGGTGTTTGAAGCATTTGGTCAGGTTGAGCTAGTCCAGCTGCCTCTTGATGAAACTGGGCACTGCAAAGGTTTTGGCTTTGTGCAGTTTGCGCGCCTTGAAGATGCAAGGAATGCTCAGAGCTTAAATGGACAGCTGGAGATTGGTGGCAGGACAATTAAGGTCTCAGTTGTTGTTGATCAAACTGGAATGCTAGAAGTTGGAGGAAATACTGGTGATTTTGATGATGATGATGGTGGTGGCTTGTCCCTAAATGCATGTTCTCGAGCATTACTCATGCAAAAGTTGGATCGAAGTGGCACTGAATCAGGTATTACTGGTTCCCTAGGTAATTCTGTTGCCAACAACACAGACCTTAACCTACCAGCTACAGCACATGTTGGAGCTGCGCCTTTGGGTTCTCCACTGGTTTCTCCAATTGCTTCAGTTCCTTCTGTAGCTGGACTGCCAGGTGGAGGTCTCCAAATTCCCACAGCTACTGCTACAATTCCTACTATCGATACAATTGGTGTTCCAAGTGAATGCTTATTGTTAAAGAATATGTTTGATCCCAAAGATGAGAAGGAACCAGATTTTGATTTGGATATCAAAGAAGATGTTGAAGCAGAATGCTCGAAGTTTGGGAAGTTAAGACATATTTATGTCGACAAGAATAGTGCTGGTTTTGTCTACTTACGATTTGAAAATACTCAATCTGCGATAAATGCACAGCGGTCTCTGCATGGGAGATGGTTTGCTGGGAAGATGATCACTGCTAGCTTCATGGTGCCTCAGGCATATGAGGAGAAATTCCAAGACAGCAGATAG 1956 0.4443 MMDFDEYEYLEKTVENPELQRKEKTNGSDGTVKLEERDHSRSSKHKASEKHNDVDCHSKQLKFGDDSCDYDNHKERESSRHRSLSKDGDKEKDRHRSIQDYRDRVRDRERVKEEKYSRERERQRKHDRDRERDKRDRGSESERERERDHSWRSRNISERHRSDLDERDRERSRDRDHRDRERSRDKDYKDRERETESRERDKDSRFWELADMVERSSDGLSGNWARHRTSDHGFQSFSLPERHKDKKEEAAEPEVDPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVASGSTGLIGPYSGGARRLYVGNLHFSITEADLRRVFEAFGQVELVQLPLDETGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSVVVDQTGMLEVGGNTGDFDDDDGGGLSLNACSRALLMQKLDRSGTESGITGSLGNSVANNTDLNLPATAHVGAAPLGSPLVSPIASVPSVAGLPGGGLQIPTATATIPTIDTIGVPSECLLLKNMFDPKDEKEPDFDLDIKEDVEAECSKFGKLRHIYVDKNSAGFVYLRFENTQSAINAQRSLHGRWFAGKMITASFMVPQAYEEKFQDSR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph9g0641 651 CDD RRM3_RBM39_like 556 638 - -
Enph9g0641 651 Gene3D - 353 445 IPR012677 -
Enph9g0641 651 PANTHER SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED 2 649 IPR006509 GO:0003723|GO:0005634|GO:0006397
Enph9g0641 651 SUPERFAMILY RNA-binding domain, RBD 553 637 IPR035979 GO:0003676
Enph9g0641 651 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 557 640 IPR000504 GO:0003723
Enph9g0641 651 MobiDBLite consensus disorder prediction 222 236 - -
Enph9g0641 651 Gene3D - 552 651 IPR012677 -
Enph9g0641 651 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 262 339 IPR000504 GO:0003723
Enph9g0641 651 Pfam linker between RRM2 and RRM3 domains in RBM39 protein 457 575 IPR029123 -
Enph9g0641 651 MobiDBLite consensus disorder prediction 1 201 - -
Enph9g0641 651 Gene3D - 255 348 IPR012677 -
Enph9g0641 651 FunFam Splicing factor, CC1-like protein 552 651 - -
Enph9g0641 651 SMART rrm1_1 367 439 IPR000504 GO:0003723
Enph9g0641 651 SMART rrm1_1 263 335 IPR000504 GO:0003723
Enph9g0641 651 SMART rrm1_1 558 636 IPR000504 GO:0003723
Enph9g0641 651 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 581 633 IPR000504 GO:0003723
Enph9g0641 651 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 368 437 IPR000504 GO:0003723
Enph9g0641 651 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 272 331 IPR000504 GO:0003723
Enph9g0641 651 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 366 443 IPR000504 GO:0003723
Enph9g0641 651 FunFam RNA-binding protein 39 isoform X1 255 347 - -
Enph9g0641 651 MobiDBLite consensus disorder prediction 237 261 - -
Enph9g0641 651 SUPERFAMILY RNA-binding domain, RBD 363 461 IPR035979 GO:0003676
Enph9g0641 651 SUPERFAMILY RNA-binding domain, RBD 257 355 IPR035979 GO:0003676
Enph9g0641 651 FunFam CC1-like, splicing factor 361 469 - -
Enph9g0641 651 SMART rrm2_1 367 439 IPR003954 GO:0003676
Enph9g0641 651 SMART rrm2_1 558 636 IPR003954 GO:0003676
Enph9g0641 651 MobiDBLite consensus disorder prediction 218 261 - -
Enph9g0641 651 CDD RRM1_RBM39_like 263 335 - -
Enph9g0641 651 NCBIfam splicing factor, CC1-like family 137 649 IPR006509 GO:0003723|GO:0005634|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph9g0641 Enph-Chr9 11679264 11690248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph9g0641 263 429 Eukaryotic Initiation Factors Gene Family AT4G34110 28.994 1.98e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph9g0641 K13091 - qsa:O6P43_011435 762.296