LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g0566	ATGAATAAGCGTCTGGAAGTTGGGAGGGCCGCCTCAGGTAAAAGAAGACTGAAAGACCTATTGCTTCAAAAAGATAATCGTTTTTGTGCTGATTGTAATGCTCCAGATCCCAAATGGGCGTCCGCTAATATTGGTGTTTTTATTTGCTTAAAATGTTGCGGTGTGCACAGAAGCCTTGGTACTCATATATCAAAGGCTCATATTCCAGAAGGATATAGTAAGCCAACACCGGATGCTGGTCATGAGCAACGTTTTAATTTCATCCGATCCAAGTATGAGCTTCAAGACTTTTTGAAACCTGGTTTGCGTATTTCATCTGGAAAAAACTCTCTAGAGTCAAATTCTTCCAACAAAACTATGGATGGTTCCCGAAAAACAAGTGGTTCACGGAAATCGGAAGGTATGGTAGAATTTATTGGATTGCTGAAGGTCAAAGTAGTTAAAGGCACAAATTTAGCTATTCGGGACATGATGTCAAGTGATCCATATGTCATTTTAAAACTTGGCCAACAGACCGTTCAGACAACTGTAATGAACAGTAACTTGAATCCTGTTTGGAATGAGGAACTCATGCTATCTGTTCCTCAAGAATATGGAGCATTGAAGTTGCAAGTATATGATCATGACACATTTTCAGCCGATGATATAATGGGAGAGGCAGAAATTGACCTCCAACCTATGATAACGTCAGCAATGGCGTTTGGAAATGCAGAAATGTTTGGCGATATGCAGATTGGAAAATGGCTTAAATCTGATGACAATGCTCTTATAGAGGATAGCTTAGTCAATATAGTTGATGGAAAGATTTTACAAAAAATGACACTCAAGCTCCAGAATGTTGAATCTGGAGAATTAGATCTAGAACTCGAATGGATGCCTCTTGATCAATAG	891	0.3917	MNKRLEVGRAASGKRRLKDLLLQKDNRFCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKAHIPEGYSKPTPDAGHEQRFNFIRSKYELQDFLKPGLRISSGKNSLESNSSNKTMDGSRKTSGSRKSEGMVEFIGLLKVKVVKGTNLAIRDMMSSDPYVILKLGQQTVQTTVMNSNLNPVWNEELMLSVPQEYGALKLQVYDHDTFSADDIMGEAEIDLQPMITSAMAFGNAEMFGDMQIGKWLKSDDNALIEDSLVNIVDGKILQKMTLKLQNVESGELDLELEWMPLDQ	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph9g0566	296	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	14	74	IPR001164	GO:0005096
	Enph9g0566	296	Pfam	Putative GTPase activating protein for Arf	15	66	IPR001164	GO:0005096
	Enph9g0566	296	MobiDBLite	consensus disorder prediction	105	131	-	-
	Enph9g0566	296	Pfam	C2 domain	141	230	IPR000008	-
	Enph9g0566	296	MobiDBLite	consensus disorder prediction	106	123	-	-
	Enph9g0566	296	FunFam	ADP-ribosylation factor GTPase-activating protein AGD12	138	296	-	-
	Enph9g0566	296	SUPERFAMILY	ArfGap/RecO-like zinc finger	14	99	IPR037278	-
	Enph9g0566	296	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12	7	65	IPR044518	GO:0005096\|GO:0005543
	Enph9g0566	296	SMART	C2_3c	141	236	IPR000008	-
	Enph9g0566	296	Gene3D	C2 domain	138	296	IPR035892	-
	Enph9g0566	296	SMART	arf_gap_3	14	105	IPR001164	GO:0005096
	Enph9g0566	296	Gene3D	Arf GTPase activating protein	3	90	IPR038508	-
	Enph9g0566	296	ProSiteProfiles	C2 domain profile.	119	237	IPR000008	-
	Enph9g0566	296	SUPERFAMILY	C2 domain (Calcium/lipid-binding domain, CaLB)	136	225	IPR035892	-
	Enph9g0566	296	CDD	ArfGap	17	92	-	-
	Enph9g0566	296	CDD	C2_ArfGAP	139	283	-	-
	Enph9g0566	296	PRINTS	HIV Rev interacting protein signature	26	45	IPR001164	GO:0005096
	Enph9g0566	296	PRINTS	HIV Rev interacting protein signature	45	62	IPR001164	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g0566	Enph-Chr9	10727969	10734428	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g0566	7	296	C2H2 Transcription Factor Family	AT4G21160	65.455	2.29e-157	441

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g0566	K12486		-	qsa:O6P43_013125	468.003