LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g0192	ATGACGAGAAGGAAGATTCAGATAAAGAAAATAGACAGTATAACAGCGCGGCAAGTGACTTTCTCAAAGAGAAGGAAAGGTCTGTTCAAGAAGGCACAGGAACTCTCAACTCTTTGTGATGCTGAGATTGCTCTCTTGGTCTTCTCTTCCACTGGCAAGCTCTTTGATTATGCTAGCTCAAGTATGCAGCAGATCATTGAAAGGCATGATCAACATTCAGCCATTCATAGAGGTCAATCATCTGATAAACTTCTGGATGAAAGAATTGTGAAGCAGATCAATGCACTTAAGAGAAAGGGAGCTGAACTCATGGAAGAAAATAGAAAAATGAAGCAGGTACAGAGCCTTGAACAAGGGCAGTCTTCTGAGTCCTTCATCGTTTGCAGTTCATCTGACAATCCTCCTCCAGATTATGATAGTTCAGACACATCTCTCAGGCTGGGGTTGTCGTTATTCAAATAA	462	0.4156	MTRRKIQIKKIDSITARQVTFSKRRKGLFKKAQELSTLCDAEIALLVFSSTGKLFDYASSSMQQIIERHDQHSAIHRGQSSDKLLDERIVKQINALKRKGAELMEENRKMKQVQSLEQGQSSESFIVCSSSDNPPPDYDSSDTSLRLGLSLFK	153

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph9g0192	153	Coils	Coil	93	113	-	-
	Enph9g0192	153	ProSitePatterns	MADS-box domain signature.	3	57	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	CDD	MADS_MEF2_like	3	77	IPR033896	GO:0000977\|GO:0045944
	Enph9g0192	153	FunFam	Transcription factor, MADS-box	13	82	-	-
	Enph9g0192	153	SUPERFAMILY	SRF-like	2	85	IPR036879	GO:0003677\|GO:0046983
	Enph9g0192	153	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	57	IPR002100	GO:0003677\|GO:0046983
	Enph9g0192	153	MobiDBLite	consensus disorder prediction	108	143	-	-
	Enph9g0192	153	Gene3D	-	14	95	IPR036879	GO:0003677\|GO:0046983
	Enph9g0192	153	MobiDBLite	consensus disorder prediction	113	143	-	-
	Enph9g0192	153	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	3	119	-	-
	Enph9g0192	153	ProSiteProfiles	MADS-box domain profile.	1	61	IPR002100	GO:0003677\|GO:0046983

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g0192	Enph-Chr9	6437976	6444064	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g0192	1	149	MADS-box Gene Family	AT2G22540	36.017	1.34e-37	127

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Enph9g0192		SRF-TF	1.6e-24	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g0192	-		-	pcin:129285578	188.734