LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g0046	ATGGCTACCTTGGAATTTTCTTCCTCCAGAACTAAATCTCATACACAAGCTACACATATATTTCAGTATAACACCAATGAAACTCATCTCTCCTTTGAAGACATGAAGCTTCCTTCAATATTTTTCATTCTGCTGCTCCTGTACTCTGTGCTCTCTCAATTCCTCCATTGTTGCTGCCAACAAGAATACCTTAACAACTCTATCTATAACTGCACTTTCAACCTCACAACAAAAACAGGATACATCTGTAATGGCCTCCATCAGTCATGCACCTCCTTCGTCACCTTCAGATCTGAACCTTCTTATGACACCACTCAAAGCATAGCAAATCTTCTCGGCTCTGAAGCATCTTCCATAGCCTCCATCAACAAAATCTCAAGCAGTGACAACAACATTATTCCTTCCAATCAAACTGTGGTTGTTCCTGTTTATTGTTCTTGTTCTGGAAATATCTACCAGCATGCCACTCCTTATGTCATTAAGAAAGGTGAATACTACTACAAATTGGCCAATGAGACCTATCAAGGCCTCGCCAGTTGCCAGATGCTAGTACGTCAGAATTATTACGTTCCTGACAATATCAGTATTGGCGCTCAAGTTACAGTTCCTGTGTTATGTGCTTGTCCCACTGCTGAACAGATCTCAGATGGGGTCTCCTCCTTGCTGGTTCATACATTTGACTATGATGATTCAATTGAATCAGTTGCAGAGAATTATGGTGTGGATCAACAGAGTCTGCTAAGTGCTAATGAGTTGCCTTTAAACGCAACTGTATCACCGTCGACGCCTCTCTTAGTTCCCCTCAAACCTTCCTCTTGTAAACTCAATTCACATGTATTCTACTGTACTTGTTCATTCTCCCAGACATACCTTCCAAATTCAAGTGTCAACAATCTCTATTGTGATCGTCTTCAAACTAATGCTCATCATTTTCCTGTCAGATTGGTTGTTTTCTTAGGTGTAGGTGCTGGTGCTGGCTTTTTATGCTTATTTCTTTTGGGCTACAAGTTACATCAATGCTTAAAACAAAAGCAAGAAAGGGACCATAAGGAAAAATTGTTCAGGCAAAATGGTGGCCTCTTGCTACAAGAAAAGATGTCACAGTATGGAAATAGAGAGCAAGCAAAACTTTTCACAGCAGAAGAGTTGTCACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTATGGTATTGTTTACAAAGGAATGTTACCAGATGGTAGCATCGTCGCAGTAAAGAAGTCAAGAGAAATTGTGAGAAACCAGATTGAGACTTTCATTAATGAAGTGGTGATTCTGTCCCAAATAAACCACAGGAACATTGTCCAACTCTTAGGTTGTTGTCTAGAGACTGAAGCCCCATTACTAGTGTATGAATTTATTCCCAATGGAACACTTTCTCACCATATCCATAACCAGGAACTTGGGTCTAACCTTTCATGGGACAGCCGATTCAGAATTGCTTGTGAGGTTGCTGGGGCAGTGGCCTATATGCATTCTGCAGCTTCCATTCCAATCTTCCACAGAGACATAAAAACTTCCAACATACTCCTTGATCATAACTACAAAGCCAAAGTGTCTGATTTTGGGTCTTCCAGATCAGTCCCAAATGATAGGTCTCACTTGACCACAATAGTACAAGGCACTTTTGGGTATATAGATCCTGTATACTTCCAATCCAGCCAATTCACTGATAAAAGTGATGTATATAGTTTTGGGGTGGTACTTGTAGAGCTGATTACTGGAAGAAAACCCTTTTCAGAAGAAGCTGAGGGTCAAAACCTTGTTGCAGAATTCATTTCTTTGATGAAGGAGGGTCGAGTTTTCGATATTTTAGATGATAGAGTTGTTTGTGAAGGAAGTAATGATAATATTCTTAGCATTGCAAATCTTGCAATGAGATGCTTGAGACTCAATAGGATGAAGAGACCTTCAATGAGAGAGGTTTCAACAGAGTTAGAAGCACTGAGAAAGACACAAAATTCATTAGAGATCACTGAATATTCTCTTGAATTTCCAAATGATAAGGACATCACTCCTTTTCAAACTATCCAAGAGTCCACAGAAGAAAGCATGTCATTGTTTTCCCAAATGGACTCCACATCCATCTGA	2127	0.3996	MATLEFSSSRTKSHTQATHIFQYNTNETHLSFEDMKLPSIFFILLLLYSVLSQFLHCCCQQEYLNNSIYNCTFNLTTKTGYICNGLHQSCTSFVTFRSEPSYDTTQSIANLLGSEASSIASINKISSSDNNIIPSNQTVVVPVYCSCSGNIYQHATPYVIKKGEYYYKLANETYQGLASCQMLVRQNYYVPDNISIGAQVTVPVLCACPTAEQISDGVSSLLVHTFDYDDSIESVAENYGVDQQSLLSANELPLNATVSPSTPLLVPLKPSSCKLNSHVFYCTCSFSQTYLPNSSVNNLYCDRLQTNAHHFPVRLVVFLGVGAGAGFLCLFLLGYKLHQCLKQKQERDHKEKLFRQNGGLLLQEKMSQYGNREQAKLFTAEELSRATDNYNQSRFLGQGGYGIVYKGMLPDGSIVAVKKSREIVRNQIETFINEVVILSQINHRNIVQLLGCCLETEAPLLVYEFIPNGTLSHHIHNQELGSNLSWDSRFRIACEVAGAVAYMHSAASIPIFHRDIKTSNILLDHNYKAKVSDFGSSRSVPNDRSHLTTIVQGTFGYIDPVYFQSSQFTDKSDVYSFGVVLVELITGRKPFSEEAEGQNLVAEFISLMKEGRVFDILDDRVVCEGSNDNILSIANLAMRCLRLNRMKRPSMREVSTELEALRKTQNSLEITEYSLEFPNDKDITPFQTIQESTEESMSLFSQMDSTSI	708

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph9g0046	708	SUPERFAMILY	Protein kinase-like (PK-like)	372	658	IPR011009	-
	Enph9g0046	708	SMART	LysM_2	157	203	IPR018392	-
	Enph9g0046	708	SMART	LysM_2	223	267	IPR018392	-
	Enph9g0046	708	SMART	LysM_2	93	142	IPR018392	-
	Enph9g0046	708	Pfam	LysM domain	103	142	IPR018392	-
	Enph9g0046	708	Coils	Coil	651	671	-	-
	Enph9g0046	708	Pfam	Protein kinase domain	390	654	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph9g0046	708	ProSiteProfiles	Protein kinase domain profile.	390	661	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph9g0046	708	Gene3D	Phosphorylase Kinase; domain 1	357	465	-	-
	Enph9g0046	708	CDD	STKc_IRAK	396	661	-	-
	Enph9g0046	708	ProSitePatterns	Protein kinases ATP-binding region signature.	396	419	IPR017441	GO:0005524
	Enph9g0046	708	Gene3D	Transferase(Phosphotransferase) domain 1	466	678	-	-
	Enph9g0046	708	FunFam	Wall-associated receptor kinase 2	466	677	-	-
	Enph9g0046	708	SMART	serkin_6	390	661	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph9g0046	708	FunFam	Wall-associated receptor kinase 2	360	465	-	-
	Enph9g0046	708	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	511	523	IPR008271	GO:0004672\|GO:0006468
	Enph9g0046	708	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	56	666	IPR045274	GO:0007166
	Enph9g0046	708	ProSiteProfiles	LysM domain profile.	222	266	IPR018392	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g0046	Enph-Chr9	2317156	2320347	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g0046	317	665	Receptor kinase-like Gene Family	AT1G16130	55.807	2.97e-132	406

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Enph9g0046		Pkinase	2.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g0046	-		-	gmx:100795455	785.408