Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g1020 ATGGCTTCCCTTCCGGCCTCTTATTGGTGCTACAGCTGCACCCGCTTTGTTCGCCTCTTGGATCGGGACGACATCGCTTGCCCTCACTGCCAAAGCGGCTTCGTTGAAGAGATCCACAACCACCCCTCTTCCGATCATCATCACCTCAGCCCCTTCCCTCCTTCTATCTTCCCCGACTCAGCTCCTACTTCCTACGATTTAAGCAGACAAGTCTTCCATCGAAGACGCCGCAACGCCGGTAACAGATCTCCCTTTAACCCTGTAATTGTTCTCCGTGGACCCATCGACGGTGCCGCTGGCCAGAACGGTGTCGGTGGTGATCAGGAGGAAAGCAGCTTCGAGCTGTACTACGATGATGGAGACGGCTCCGGTCTTCGACCCTTGCCGCCGGCCATGTCTGAGTTCTTACTAGGGTCAGGGTTTGAACGGCTTCTGGAGCAGTTTGCCCAGATCGAAATGAATGGGTTCGGGCGATCCGAGAACCCGCCCGCTTCTAAAGCGGCCATAGAGTCGATGCCAACGATTGAGGTTGGGGAGACCCATGTGGGTTCCGACGCACACTGTGCCGTGTGCAAGGAAGCTTTCGAACTCGGTACGGAGGCGCGTGAAATGCCTTGCAAGCACATATATCACTCAGACTGCATCCTCCCATGGCTTTCGATGCGCAATTCGTGCCCTGTCTGCCGCCACGAGCTGCCGTCGGATCGAAACCCATTAGAAAGTAGAATGTCGGGGCAAATCGAAGACGAAACAGTAGGGCTAACGATTTGGAGACTACCTGGTGGGGGTTTCGCAGTTGGTAGGTTTTCCGGCGGTCGTAGAACTGGTGAAAGCCATTTCCCTGTTGTGTACACAGAAATGGACGGTGGACTTAATACAACTGGAGCTCCCAGAACAATTTCCCGAGCTGCAAGAAGCACCAGAGTTAGAGAAAGTGGTGGATTTGGTAGAATCTTTCGCAATTTCATGTCATTCTTTGGGAGGCGTCGGAGGGCATCTTCATCTTCTGGTTCTGAGCGCGAGTCCATGAGTATAAGCCATAGCCATTCGAGTGGAATGGAAGGAGGGAAGGAGCGTCAGAATTTGAACTGTAGTTGGAGTCTCCATAACTCCATAAGAGTTGGGGTTTATAAATAA 1137 0.5295 MASLPASYWCYSCTRFVRLLDRDDIACPHCQSGFVEEIHNHPSSDHHHLSPFPPSIFPDSAPTSYDLSRQVFHRRRRNAGNRSPFNPVIVLRGPIDGAAGQNGVGGDQEESSFELYYDDGDGSGLRPLPPAMSEFLLGSGFERLLEQFAQIEMNGFGRSENPPASKAAIESMPTIEVGETHVGSDAHCAVCKEAFELGTEAREMPCKHIYHSDCILPWLSMRNSCPVCRHELPSDRNPLESRMSGQIEDETVGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMDGGLNTTGAPRTISRAARSTRVRESGGFGRIFRNFMSFFGRRRRASSSSGSERESMSISHSHSSGMEGGKERQNLNCSWSLHNSIRVGVYK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g1020 378 SUPERFAMILY RING/U-box 168 236 - -
Enph8g1020 378 SMART ring_2 188 228 IPR001841 -
Enph8g1020 378 Pfam Ring finger domain 187 229 IPR001841 -
Enph8g1020 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 235 IPR013083 -
Enph8g1020 378 MobiDBLite consensus disorder prediction 330 359 - -
Enph8g1020 378 FunFam E3 ubiquitin-protein ligase RING1-like 150 235 - -
Enph8g1020 378 Pfam zinc-ribbon 7 38 IPR039525 GO:0061630
Enph8g1020 378 ProSiteProfiles Zinc finger RING-type profile. 188 229 IPR001841 -
Enph8g1020 378 CDD RING-H2_RNF126-like 188 229 - -
Enph8g1020 378 Pfam Protein of unknown function (DUF1117) 252 349 IPR010543 -
Enph8g1020 378 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 78 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g1020 Enph-Chr8 18428230 18429868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g1020 127 240 C3H Transcription Factor Family AT5G01980 42.982 4.53e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g1020 K11982 - gmx:100792874 464.536