Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g0987 ATGTCTGCAGCTCTGGATATGACCCTCGATGATATCATCAAGAAAAACAAGAAGTCGGGATCTGGCAACTCAAGAGGTCGTGGCCGAGGATCCGGTCCCGGACCTGCGCGCCGCCTCCCTAATCGCGCCGCCAATCGTGTAGCACCGTATTCAACTGCAAAGGCACCGGAGGCGACGTGGCAGCACGACATGTTTGCCGATCAGCCTATGGCACCGCACTCAGCTCAAGGCGCTCGAGCTTCTTCCATAGAAACGGGGACCAAGCTCTACATATCTAATTTGGATTACGGTGTTTCCAACGAGGATATCAAGGAGTTGTTTTCTGAAGTTGGTGACCTAAAACGGTATGCAATACATTATGACAGGAGTGGCAGATCAAAGGGTACCGCTGAAGTAGTCTTTTCACGACGAGCTGATGCTGTAGCTGCAGTTAAGAAATACAACGATGTTCAACTTGATGGCAAACCAATGAAGATTGAGATTGTGGGGACGAACATTGCTACACCTGCCATTGCTCCTGCTGCAAATGGAGCTGTTGGAAATTCAAACGGTGTTCCTAGAATTGGACAAGGTAGAGGTGGGGCATTTGCAAGGCCACGTGGTGGAGTTAGAGGCCGTGGCTTTCTGAGGGGTCGAGGACGTGGAAGAGGTCGTGGAGAGAAGGTATCTGCAGAAGATCTTGATGCTGATTTGGAGAAGTATCATTCAGAGGCAATGCAACTAAACTGA 729 0.5007 MSAALDMTLDDIIKKNKKSGSGNSRGRGRGSGPGPARRLPNRAANRVAPYSTAKAPEATWQHDMFADQPMAPHSAQGARASSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRADAVAAVKKYNDVQLDGKPMKIEIVGTNIATPAIAPAANGAVGNSNGVPRIGQGRGGAFARPRGGVRGRGFLRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQLN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g0987 242 Gene3D - 66 226 IPR012677 -
Enph8g0987 242 MobiDBLite consensus disorder prediction 1 52 - -
Enph8g0987 242 MobiDBLite consensus disorder prediction 192 224 - -
Enph8g0987 242 FunFam THO complex subunit 4 80 224 - -
Enph8g0987 242 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Enph8g0987 242 CDD RRM_THOC4 87 161 - -
Enph8g0987 242 Coils Coil 224 242 - -
Enph8g0987 242 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Enph8g0987 242 Pfam C-terminal duplication domain of Friend of PRMT1 189 237 IPR025715 -
Enph8g0987 242 SUPERFAMILY RNA-binding domain, RBD 62 193 IPR035979 GO:0003676
Enph8g0987 242 SMART rrm1_1 88 160 IPR000504 GO:0003723
Enph8g0987 242 SMART FoP_duplication_2 169 242 IPR025715 -
Enph8g0987 242 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g0987 Enph-Chr8 18158524 18163673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g0987 86 161 Eukaryotic Initiation Factors Gene Family AT2G23350 35.526 1.74e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g0987 K12881 - qsa:O6P43_028263 308.916