Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g0817 ATGAGTAATAATAAGGTTGCAGACCAACAATTATCCACTGTTCGATCCATCGTTGGTGCCGAATATACTGACATGGATATCATTAGAGCCCTGCACTTGGCCAAAAACGATGTCACCGCTGCCATTAACATTATTCTTGATACCCCTAAGTTCAAATTGAAGGAGAATTTAACCGTAGGCACTCAGAGGAATTCCCAAGTTTCGCATCGAAGTATAGGCTCTGATTATGGAATCGGAGGTGGAAGTGTCACGGCGAAGTCCAAGCCAACTGCTGCAAAGGCCAAGAATCGCTCTCTGGGATCGGAATTAAATGTCGTCGACTCGGTTTCTAACTCAGGTGATTGTACCGTTGATGATGTGGGAGGGCGTTCAAGTTCAGCTGCAAGCGATTGGTGGTTCGTGGGTTCTGCGGAAATGGCAGGGCTTTCGACCTGTAAAGGAAGGACTATCAATCCTGGTGATCAAGTGTTGTTCAAGTTTCCGCAGAAGACAGGGTCAACTACGCCGTCACCAGGTAAGGGTTTTGGACGGGGACGGCTGACAGCAGCAACTTGTTCGGAGATAGTGCGATTCTGTACTAAAGAAACAGGAGAGATTGGTAGAATACCGACTGAATGGGCTCGGTGTCTCTTGCCCCTTGTAAGGGATAAGAAGATCAGGATTGATGGGCATTGTAAATCTGTTCCCACTAATTTGAGCATTATGGATACTATTCTTTTGTCAATCAGAGTATTCTTCAACAGCTCGATGTTTTGTAAACATCACCAGGTTTCTCTTAAGGATGCCACAAATTCCAGTGATGAATCAGTTTTTCATCCTCTTCCAACATTGTTTAGGTTGCTAGGCTTGAGCCCTTTCAAAAAGGCAGAGTTCACTCCTGGTGATTTGTACTCAAAGAAGCGCCCTTTCAACGAAGAGGAGAACTCTTCTCTTCAGGCGACATTACTGCACATCAAATCTAAGCATCTATCTGTTGACAATAATGAGGCAGACAATGAAGATTCAATATCTGAAACTGATCTTGACAAGATTGTTGGTGTTGGAACCTGCTCAGAGCTAGAGGAAATGGATCCTCCTGGTAGTCTTCAGTGCGAACTGCGGCCCTATCAAAAGCAGGCTCTTCACTGGATGATCCAGCTGGAGAGGGGACTACCTATGGATGAGGCAGCAACAACCCTTCATCCATGTTGGGAGGCATATCACCTGGCAGACAGGAGGGAGCTGGTTATTTATTTGAATGTTTTTTCCGGTGAAGCTACAATAGAATTTCCAAGCACACTTCAGATGGCTAGAGGAGGAATTTTAGCAGATGCTATGGGGCTTGGAAAGACTATTATGACTATAGCCCTCCTTCTTGCCCATTCGGGCAGTGGTGGATCATCAAGTAGTCAACTCATGGATCATCCCATCACTGAAAGTGAAGTTAATGACAAGGTGCAAAACTTTTCAAACATACCTAGGAAGGCAACAAAGTTTGCTGGTCTTGATAAACTGAGGAAGCAAAGGAATGCTCTAACTAGTGGTGGCAGTCTGATAATATGTCCTATGACTCTTCTAGGACAGTGGAAGGCAGAGATTGAAACTCATGTACAGCCTGGATCTCTGTCTTTATATGTTCATTATGGACAGAGTAGACCGAAAGATGCAAGAACTCTAGCTCAGAGTGATGTTGTAATCACTACATATGGAATTGTAGCCTCTGAATTTTCCAGTGAGAATTTAGAGGATAATGGTGGACTTTTCTCAATTCGGTGGTTTAGAGTTGTTCTGGATGAGGCACATACGATAAAATCATCCAAAAGCCAAATTTCTATGGCAGCTTCTTCTTTAGTTGCTGACAGGCGTTGGTGTCTTACTGGCACTCCTATTCAGAACAATCTTGAGGATATTTACAGCCTTCTTCGATTTCTGAGAATAGAGCCTTGGGGTCACTGGGCCTGGTGGAACAAACTTGTTCAGAAACCATTTGAGGAGGGTGATGAGAGAGGGCTGAAGTTGGTTCAATCCATCTTGAAGCCAATCATGTTGAGGAGAACCAAACATAGCATGGATCGAGACGGCAAGCCTATTATAGTTCTTCCTCCTGCTGACATGCAGATAATTTACTGTGAACTCACAGAAGCTGAAAAGGACTTTTACGAGGCACTATTCAAAAGATCTAAGGTCAAGTTTGATCAGTTTGTTGAGCAAGGGCGTGTTCTTCATAATTATGCTTCCATATTGGAGCTGCTCTTACGTCTTCGTCAATGCTGTGATCATCCATTTCTTGTAATGAGCCGAGGTGATACTCAAGAATTTTCTGATCTAAACAAACTAGCAAGACATTTCCTCAAAGGAAGTCATAATTCTTCAGAAGGGGAAGTAAAAGATGCACCTTCACGGGCTTATGTTCAGGAAGTTGTGGAAGAGCTACATGCAGTCCTGACTCCTTGTGCCCACTGCTTATGCCGGGAATGCCTCTTAGCTAGTTGGCGGAATTCTACTTCTGGTTTATGCCCTGTTTGTCGGAAAACAATTAGCAGGCAGGACCTTTTAACTGTTCCCAGGAAAAGTCGGTTTCAGATTGATATTGAGAAGAACTGGGTGGAGTCATGCAAGGTAACTGCCCTTTTGCATGAGCTTGAAAACCTTTGCCCATTGGGCTCCAAGAGCATTGTTTTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATACCCTTTACTAGGAATAACATTCCATTTGTTCGTCTTGATGGGACTTTGAGTCAGCAGCAGCGTGAAAAAGTAATTAGACGGTTCTCAGAAGACAGCAATATCCTGGTGTTGTTGATGTCACTAAAAGCTGGTGGAGTGGGTATAAATCTAACTGCAGCTTCAAATGCCTTTGTCATGGATCCATGGTGGAATCCAGCTGTAGAGGAGCAAGCTGTGATGCGCATCCATCGCATTGGACAAACAAGGAATGTAGCCATCAAACGGTTTATTGTGAAGGGAACAGTTGAGGAGAGAATGGAAGCAGTGCAAGCACGTAAACAGCGAATGATTTCTGGCGCCTTGACTGATCAAGAAGTTCGAACTGCACGAATTGAGGAGTTGAAGATGCTTTTTACTTAG 3096 0.4409 MSNNKVADQQLSTVRSIVGAEYTDMDIIRALHLAKNDVTAAINIILDTPKFKLKENLTVGTQRNSQVSHRSIGSDYGIGGGSVTAKSKPTAAKAKNRSLGSELNVVDSVSNSGDCTVDDVGGRSSSAASDWWFVGSAEMAGLSTCKGRTINPGDQVLFKFPQKTGSTTPSPGKGFGRGRLTAATCSEIVRFCTKETGEIGRIPTEWARCLLPLVRDKKIRIDGHCKSVPTNLSIMDTILLSIRVFFNSSMFCKHHQVSLKDATNSSDESVFHPLPTLFRLLGLSPFKKAEFTPGDLYSKKRPFNEEENSSLQATLLHIKSKHLSVDNNEADNEDSISETDLDKIVGVGTCSELEEMDPPGSLQCELRPYQKQALHWMIQLERGLPMDEAATTLHPCWEAYHLADRRELVIYLNVFSGEATIEFPSTLQMARGGILADAMGLGKTIMTIALLLAHSGSGGSSSSQLMDHPITESEVNDKVQNFSNIPRKATKFAGLDKLRKQRNALTSGGSLIICPMTLLGQWKAEIETHVQPGSLSLYVHYGQSRPKDARTLAQSDVVITTYGIVASEFSSENLEDNGGLFSIRWFRVVLDEAHTIKSSKSQISMAASSLVADRRWCLTGTPIQNNLEDIYSLLRFLRIEPWGHWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKHSMDRDGKPIIVLPPADMQIIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLARHFLKGSHNSSEGEVKDAPSRAYVQEVVEELHAVLTPCAHCLCRECLLASWRNSTSGLCPVCRKTISRQDLLTVPRKSRFQIDIEKNWVESCKVTALLHELENLCPLGSKSIVFSQWTAFLDLLQIPFTRNNIPFVRLDGTLSQQQREKVIRRFSEDSNILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTRNVAIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFT 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g0817 1031 ProSitePatterns Zinc finger RING-type signature. 811 820 IPR017907 -
Enph8g0817 1031 Pfam Helicase conserved C-terminal domain 873 978 IPR001650 -
Enph8g0817 1031 SMART helicmild6 895 978 IPR001650 -
Enph8g0817 1031 SUPERFAMILY RING/U-box 804 846 - -
Enph8g0817 1031 SMART HIRAN_2 134 246 IPR014905 GO:0003676|GO:0008270|GO:0016818
Enph8g0817 1031 SMART ultradead3 362 659 IPR014001 -
Enph8g0817 1031 Pfam SNF2-related domain 369 756 IPR000330 GO:0005524|GO:0140658
Enph8g0817 1031 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 866 1031 IPR001650 -
Enph8g0817 1031 Pfam Prokaryotic RING finger family 4 804 843 - -
Enph8g0817 1031 Gene3D - 424 691 IPR038718 -
Enph8g0817 1031 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 424 640 IPR014001 -
Enph8g0817 1031 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 124 1031 - -
Enph8g0817 1031 Gene3D - 694 1031 IPR027417 -
Enph8g0817 1031 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 846 IPR013083 -
Enph8g0817 1031 CDD SF2_C_SNF 862 989 - -
Enph8g0817 1031 FunFam DNA repair protein RAD5B 421 679 - -
Enph8g0817 1031 CDD DEXDc_SHPRH-like 366 678 - -
Enph8g0817 1031 Pfam HIRAN domain 135 242 IPR014905 GO:0003676|GO:0008270|GO:0016818
Enph8g0817 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 678 IPR027417 -
Enph8g0817 1031 ProSiteProfiles Zinc finger RING-type profile. 807 836 IPR001841 -
Enph8g0817 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 1020 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g0817 Enph-Chr8 16676261 16686059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g0817 5 1031 RAD5 or RAD16-like Gene Family AT5G22750 67.901 0.0 1448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph8g0817 SNF2_N 2.6e-88 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g0817 K15505 - qsa:O6P43_000417 1552.73