Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g0328 ATGGATCCCACTAAGAAGCGAAAGCTCGACGACAACGGCGTCATCCCATCCGATTCCGACTTACACCTCACTCCCTCTGACGCACGTAAGATCATCGAGCGTTTCAGCCCCGAGCAACTCATCGATGTTCTCCAGGACGCCGTCGTCCGCCACGCTGATGTACTCGATGCTGTGCGGTCTATTGCAGACCCGGATGTTACCCAGCGCAAGCTGTTTATCCGTGGTCTCGGGTGGGAAACCACAACTGACGGCCTCCGCTCCCTCTTTTCCACCTACGGCGAGCTTGAAGAAGCCATCGTGATTCTCGATAAGGCCACTGGTAAGTCTAAGGGTTATGGGTTTGTCACCTTCAAGCACGTCGATGGTGCTTTGCTGGCTCTGAAGGAACCCAGCAAGAGAATAGATGGTCGCGTTACTGTGACGCAGCTTGCAGCGGCCGGTAATACGGGATCAAATACAAATGCTGCCGATATAGCGATGCGGAAGATATATGTTGCGAATGTGCCATCCGATCTACCGGCCGATAAATTGCTGGCACATTTCTCACTATATGGAGAGATTGAGGAGGGGCCGTTAGGGTTCGATAAGCAGACTGGTAAGTCTAAGGGGTTTGCTCTATTTGTGTACAAGACCCCGGAGGGGGCGCAAGCGGCACTTGTGGATCCGGTGAAGATGGTGGAGGGAAGGCAGTTGAATTGCAAGTTAGCGATTACCGATGGGAAGCAAGGGAAACGAGGTGGTACTGGGCCGATGGGACCTGACGGAATTCAAGGTCCCGGGAATGCTCATGGTGATGGGATGGGTTTAGCTCCACAGTCTTCGATGCCAGGGTCGCTTTCTGGTCAGTATGGTGGTCCTGTCGGCCTAGGATCATATGGGGGTTTTGGGAGCGGGCTTCCCGGACAGCCTCCGTTAGGGAATCATCCTCTGAACTCTTCTGTGGGTGGCACGGGGTTGTCTTCGGCAGGTAATCAGGCGCCCTCTTCTCTAGGAGGTACTGGCGGGTATAGTTCTGGGCTAGGCGGTCCTTATGGTGGCTACAGCGGGCCTGGGTCGACTGGTTATGGTGCAATAGGTGGTGGTGGTGCGGGTTTGGGTGGAGGTAGTGGTGGATTGGGTGCTGGTGGACTTGGTGGCTCTGGTGGTGGATTGGGTGGCGCTGGTTCTTTGTATAGATTGCCAACTTCAGTAGGAATGCCAACTGGTGGCTATCAAGATAGCGGACATTATGGTTTATCATCGGGGTATCCAAATCAACATCACCAGCCTACTGGAGCTTCACCTGTACCAAGGGTGCCCCCTGGAGCTATGTATCCAAATGTGTTTTCTATGCTACAGTATAAGATTACCTCGAAAAAAGGTGTATCATCACTTATTGGCGCAGATGCTTTATGTGGTTCTGGTGATTACGTGATTGCAGACTATGTGCTTCTGGTGTAA 1440 0.5299 MDPTKKRKLDDNGVIPSDSDLHLTPSDARKIIERFSPEQLIDVLQDAVVRHADVLDAVRSIADPDVTQRKLFIRGLGWETTTDGLRSLFSTYGELEEAIVILDKATGKSKGYGFVTFKHVDGALLALKEPSKRIDGRVTVTQLAAAGNTGSNTNAADIAMRKIYVANVPSDLPADKLLAHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQAALVDPVKMVEGRQLNCKLAITDGKQGKRGGTGPMGPDGIQGPGNAHGDGMGLAPQSSMPGSLSGQYGGPVGLGSYGGFGSGLPGQPPLGNHPLNSSVGGTGLSSAGNQAPSSLGGTGGYSSGLGGPYGGYSGPGSTGYGAIGGGGAGLGGGSGGLGAGGLGGSGGGLGGAGSLYRLPTSVGMPTGGYQDSGHYGLSSGYPNQHHQPTGASPVPRVPPGAMYPNVFSMLQYKITSKKGVSSLIGADALCGSGDYVIADYVLLV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g0328 479 Gene3D - 56 151 IPR012677 -
Enph8g0328 479 SUPERFAMILY RNA-binding domain, RBD 61 144 IPR035979 GO:0003676
Enph8g0328 479 MobiDBLite consensus disorder prediction 306 334 - -
Enph8g0328 479 MobiDBLite consensus disorder prediction 239 266 - -
Enph8g0328 479 SMART rrm1_1 70 142 IPR000504 GO:0003723
Enph8g0328 479 SMART rrm1_1 162 234 IPR000504 GO:0003723
Enph8g0328 479 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 146 IPR000504 GO:0003723
Enph8g0328 479 SUPERFAMILY RNA-binding domain, RBD 154 264 IPR035979 GO:0003676
Enph8g0328 479 FunFam UBP1-associated protein 2C isoform A 52 155 - -
Enph8g0328 479 MobiDBLite consensus disorder prediction 294 334 - -
Enph8g0328 479 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 163 220 IPR000504 GO:0003723
Enph8g0328 479 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 138 IPR000504 GO:0003723
Enph8g0328 479 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 161 238 IPR000504 GO:0003723
Enph8g0328 479 PANTHER GEO13361P1-RELATED 52 345 - -
Enph8g0328 479 Gene3D - 152 270 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g0328 Enph-Chr8 11901288 11907089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g0328 157 277 C2H2 Transcription Factor Family AT2G19380 35.537 2.86e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g0328 K12741 - qsa:O6P43_001025 580.096