Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g0279 ATGGCTCTTCTCTGTGGTTCTTCCTCGGTGACGTTTCTTTCATCTCCTACTAAATCCTCTGTTGCTCCTTCCCACCATGGAAATGCCAAAACCGCTTTTCTTGGCTTCCAATTGGCACCACCGAAGCCTTCTATACAGACCAATTTGCGCCTCAATTCTAGGGCAACTTCTCAGGTTCGTTGCCAGGACCTATCCATTGTCCCAAAAGATGAACGTTGGATGTTCGAGGATTCCGAAGTTAATGGCCCGGATATTTGGAACAATACTTGGTATCCAAAAGCAGCAGATCATGTGAACACAGATAAGCCATGGTACATTGTTGATGCTACAGATAAAATTCTTGGAAGACTGGCATCAACCATTTCTATTCATATCCGAGGGAAAAATTTGGCAACCTATACTCCTAGTGTGGACATGGGTGCATTTGTAATTGTGGTCAATGCAGAAAAAGTTGCTGTCTCTGGAAAAAAGAAGACCCAAAAGCTTTATCGGAGGCATTCTGGAAGACCTGGTGGTATGAAAGTAGAGACATTTGCCCAACTGCAGCAGAGAATTCCAGAAAGAATTATTGAACATGCTGTCCGTGGCATGCTTCCAAAAGGGAGGCTTGGCAGACAACTGTTCAACCACCTGAAGGTTTATAAGGGCCCCGATCATCCACATCAAGCTCAAAAGCCCATAGAGCTGCCAATAAGAGATAAAAGAATACAACTGCAGAGATAG 723 0.4426 MALLCGSSSVTFLSSPTKSSVAPSHHGNAKTAFLGFQLAPPKPSIQTNLRLNSRATSQVRCQDLSIVPKDERWMFEDSEVNGPDIWNNTWYPKAADHVNTDKPWYIVDATDKILGRLASTISIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKKTQKLYRRHSGRPGGMKVETFAQLQQRIPERIIEHAVRGMLPKGRLGRQLFNHLKVYKGPDHPHQAQKPIELPIRDKRIQLQR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g0279 240 FunFam 50S ribosomal protein L13 88 231 - -
Enph8g0279 240 SUPERFAMILY Ribosomal protein L13 98 232 IPR036899 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 Hamap 50S ribosomal protein L13 [rplM]. 104 239 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 NCBIfam 50S ribosomal protein L13 98 229 IPR005823 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 ProSitePatterns Ribosomal protein L13 signature. 194 216 IPR023563 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 PANTHER RIBOSOMAL PROTEIN L13 90 235 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 Pfam Ribosomal protein L13 103 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 CDD Ribosomal_L13 104 217 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph8g0279 240 Gene3D Ribosomal protein L13 93 236 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g0279 Enph-Chr8 11365724 11369767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g0279 106 239 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 29.787 1.80e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g0279 K02871 - qsa:O6P43_001091 412.535