Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g0042 ATGGATGCTCATCATGCTCTCGAGTCTAACTCTAATCCTCGTTCCTTCCTTTCGTCAGAAACCGTTTCTTCGTACGATCGCGACCCTCCTCCTCCGCCGCCAGAGAACTTTGTATCGGATTTCCAAAATCCATATGAGCAAACTGCAAATTTCGATACTGAAGACTCATCGAGAACCCTAGCTTCGAATGGTCAAAACGTCAACGGTAATCTCCTAACTGCCACTGGGAATGGGCACGAGAACGGACTGGATAACAGTCTGGGCGGTGGCGATATCAATTTGAAGCCTGGGATTGTGAAGCCATTGATTTCAGAAAACGCGGGGACCAACAACACCCAGAGTGGTACTGACAAGGATCACTCTGGTGGAGAAGAGGAAACTACTAGCAAACGTCGCCGCCGGAGTCGGTGGGATCCGCAACCCGACTCCAACGACCAGAGCGGCGGTGAAGCAGGCAGCGGGACGAAGAAGAGGAAGTCCCGTTGGGCTGATGATGAACCGAAGCCGGTGATTCAGCTTCCCGATTTCATGGGCGGTATTGAGTTTGATCCTGAAATTCAAGCGTTAAATAGTAGGCTTCTAGATATTAGTCGAATGCTGCAATCAGGTCTGCCTTTAGATGATCGGCCGGAAGGTGCTCGATCTCCTTCACCTGAACCTATATATGATAATATGGGAATTAGAATTAACACTAGAGAATATCGTGCACGCGAGAGATTGCAAAAGGAGAGGCAAGAAATCATTTCTCAGATTATCAAGAAAAACCCTGCATTTAAGCCACCCGCAGATTATAGGCCACCGAAGCTTCAGAAAAAGCTGTATATTCCAATGAAAGAGTATCCCGGGTACAACTTTATAGGGCTTATTATTGGTCCTCGAGGTAATACTCAGAAGCGGATGGAAAGAGAAACTGGTGCTAAAATTGTGATTCGGGGTAAAGGGTCGGTGAAAGAGGGTAGACTGCAACAGAAGAGGGATTTGAAACCTGATCCTTCAGAGAATGAAGATCTGCATGTTCTTGTGGAGGCAGAAACACAAGAATCACTCGAGGCAGCTGCAGGTATGGTGGAGAAGCTCTTGCAGCCTGTAGATGAGGTGTTGAATGAACACAAGAGGCAACAGCTTAGGGAACTCGCGGCATTGAATGGTACAATTAGGGATGAAGAATATTGTCGACTGTGTGGTGAACCTGGTCATCGTCAATATGCGTGTCCTACACGTACCTCTACATTTAAGAGTGAAGTGGTCTGTAAGCATTGTGGTGATGGTGGTCATCCAAGCATAGATTGTCCAGTGAAGGGAGCTACAGGCAAGAAGATGGATGATGAGTATCAGAACTTCTTGGCAGAGCTGGGAGGAACGGTTCCCGAATCAGCTATAAAGCAGAACAGCACATTGGCAATTGGTTCAGGCAATTCTGGGAGCAATCCTCCTTGGGCTAACAATTCAGGATTGACTGGTGGTACATCACAAGCGGGCTTAGGGGCTAATGCTGTTAAAAAGGAAATTGATGATACGAATTTATATATTGGCTATTTACCACCCACTCTTGATGATGATGGTCTTATCCAATTGTTTCAGCAATTTGGTGAGATTGTTATGGCTAAAGTCATAAAAGACCGAATGACTGGTTTGAGTAAAGGATATGGGTTTGTAAAATATGCTGATGTCCAGATGGCCAACAATGCAATTATGGCCATGAATGGTTATCGCCTTGAGGGCAGAACCATTGCAGTGAGGGTTGCTGGTAAGCCTCCTCAGCCTACTGTGCCTCCTGGTCCGCCAGCATCAGCCATGCCTACATATCCTGTTTCAAGCCAGCCAGTTGGTGCCTATCCATCCCAGCAATATGCTGCTGGTGGTCCTCTGGGTAGTGCACCTCCTGGAAGTTATACTAGTCCCCCAGTTCCATGGGGACCTCCTGTACCTTCTCCATATGGTCCTTATGCTCCTCCCCCACCTGGTTCAACTTTGTACCCTCCTATTCAAGGTCAATCTATTCCTCCTTATGGTGTTCAGTATCCAGCAGTCCAGCCAACCCCTCCTGGTGCCCCATCCCAGCCCACGACTTCTAGTGAACCACAACAAAGTTTTCCTCCGGGAGTGCAGTCTGACACCAGTACCTCTACTCAATCAACATCAGCCAACATTTACGGGAGTTCAATACCTGCAATGCCACCAACTGCTCAACCTACATATGCTGCATCTTATGGTTATCCGCCTTACTATGGGGCGGTTCCTCCCCCCACCTCCCCCACCTGCCCCTGTACCTATCTCAACTTCAGAGCATATGCCTTGGGGAACCAATCCTTCTTTGCCACCTCCTGTTTCATCTTCGGAGAAGACAGCATATGGTGCAGACCAATCTCAGAGCATAGGAAATGTTCCCTGGGCCACAAATCCTCCAATGCCTCCCTCTGCTTCAACTGCAGAGAAGACAACATATGGCTTGATGTTGATGTTTCTTGGAGCTCTTGTGAACCTGATTTCTTAACCTCTTGCCATGACTTTCTTGGAAGTTTGGGACTCACTTCTTTAACCTTGCTGTACTCTTATGAAATTGCAGAGATTTGGGCAAAAAGTTCAGAACAGTCTTATCATACAGGGGAGGCAACATCAAAGGGGCTTTCACTGACATGGTGTTATGAGCACCAAACTCTTCTATGGTACAGGAAAATATCAAGCCTGACATTTGTTTCCAATGTGGGTCCTTGTGACTGGCATAAGTTGACGGCTCAGATTGCAGCATACCATCATGGTTTTACTCTTGATCTGATATATTAG 2784 0.4713 MDAHHALESNSNPRSFLSSETVSSYDRDPPPPPPENFVSDFQNPYEQTANFDTEDSSRTLASNGQNVNGNLLTATGNGHENGLDNSLGGGDINLKPGIVKPLISENAGTNNTQSGTDKDHSGGEEETTSKRRRRSRWDPQPDSNDQSGGEAGSGTKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQALNSRLLDISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETQESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESAIKQNSTLAIGSGNSGSNPPWANNSGLTGGTSQAGLGANAVKKEIDDTNLYIGYLPPTLDDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADVQMANNAIMAMNGYRLEGRTIAVRVAGKPPQPTVPPGPPASAMPTYPVSSQPVGAYPSQQYAAGGPLGSAPPGSYTSPPVPWGPPVPSPYGPYAPPPPGSTLYPPIQGQSIPPYGVQYPAVQPTPPGAPSQPTTSSEPQQSFPPGVQSDTSTSTQSTSANIYGSSIPAMPPTAQPTYAASYGYPPYYGAVPPPTSPTCPCTYLNFRAYALGNQSFFATSCFIFGEDSIWCRPISEHRKCSLGHKSSNASLCFNCREDNIWLDVDVSWSSCEPDFLTSCHDFLGSLGLTSLTLLYSYEIAEIWAKSSEQSYHTGEATSKGLSLTWCYEHQTLLWYRKISSLTFVSNVGPCDWHKLTAQIAAYHHGFTLDLIY 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g0042 927 FunFam splicing factor-like protein 1 261 389 - -
Enph8g0042 927 SUPERFAMILY RNA-binding domain, RBD 502 596 IPR035979 GO:0003676
Enph8g0042 927 FunFam splicing factor-like protein 1 486 588 - -
Enph8g0042 927 ProSiteProfiles Zinc finger CCHC-type profile. 417 431 IPR001878 GO:0003676|GO:0008270
Enph8g0042 927 MobiDBLite consensus disorder prediction 654 721 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 674 688 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 583 604 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 1 172 - -
Enph8g0042 927 SMART c2hcfinal6 390 406 IPR001878 GO:0003676|GO:0008270
Enph8g0042 927 SMART c2hcfinal6 416 432 IPR001878 GO:0003676|GO:0008270
Enph8g0042 927 ProSiteProfiles Zinc finger CCHC-type profile. 391 405 IPR001878 GO:0003676|GO:0008270
Enph8g0042 927 PANTHER RNA-BINDING PROTEIN RELATED 122 628 IPR045071 -
Enph8g0042 927 Pfam KH domain 284 356 IPR004088 GO:0003723
Enph8g0042 927 MobiDBLite consensus disorder prediction 466 487 - -
Enph8g0042 927 SUPERFAMILY Retrovirus zinc finger-like domains 387 433 IPR036875 GO:0003676|GO:0008270
Enph8g0042 927 SMART kh_6 269 361 IPR004087 GO:0003676
Enph8g0042 927 MobiDBLite consensus disorder prediction 314 335 - -
Enph8g0042 927 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 506 584 IPR000504 GO:0003723
Enph8g0042 927 Pfam Splicing factor 1 helix-hairpin domain 158 265 IPR032570 -
Enph8g0042 927 MobiDBLite consensus disorder prediction 118 140 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 40 82 - -
Enph8g0042 927 CDD KH-I_BBP 268 361 - -
Enph8g0042 927 Gene3D - 390 442 - -
Enph8g0042 927 Gene3D K Homology domain, type 1 261 389 IPR036612 GO:0003723
Enph8g0042 927 MobiDBLite consensus disorder prediction 8 25 - -
Enph8g0042 927 Gene3D - 183 260 IPR047086 -
Enph8g0042 927 SMART rrm1_1 507 580 IPR000504 GO:0003723
Enph8g0042 927 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 508 577 IPR000504 GO:0003723
Enph8g0042 927 MobiDBLite consensus disorder prediction 689 721 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 152 168 - -
Enph8g0042 927 Gene3D - 484 589 IPR012677 -
Enph8g0042 927 FunFam splicing factor 1 389 442 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 585 601 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 613 632 - -
Enph8g0042 927 MobiDBLite consensus disorder prediction 203 224 - -
Enph8g0042 927 ProSiteProfiles Type-1 KH domain profile. 284 356 - -
Enph8g0042 927 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 269 395 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g0042 Enph-Chr8 3869118 3874165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph8g0042 506 637 Eukaryotic Initiation Factors Gene Family AT3G16380 29.932 6.26e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g0042 K13095 - qsa:O6P43_001652 1085.48