Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph7g1900 ATGAAGGAAGGTAACCCACATGCCACATCAAGGCAGTCTGCTTATTACTTTGCTGTGTCTCCGACCCGACGACGAACAAAACCCAAACGGGGCCGAAGAACAAAACCCAGCACCTATGCAAAGATGAGTTCCTTCTCCATCACAAGGAAAAAAACACCATTCCAAAAGCACAGAGAAGAGGAAGAGGCGAAAAAGAAGTCCAAAGATGGGGTGTCTGGTCCAAAGAAGGGAAGTAGGTATGTTCCATCTTTTATTCCTCCTCCTTTGGCAACCAAGGGAAAAGAATCTGAGAAGAAAAAAGAAGAGGAGAAGCCTAAGGAGAAGGAGAAGGAGAAGGGTAAGTCAAGGAACATAGATAATTTTATGGAGGAGTTAAAACATGAGCAAGAAATGAGGGAGAGACGAAACCAAGAACGTGAACATTGGCGTGACGGGCGCAATGTAGAACATTCTACTATCAGTCGCTTTGATGAACTGCCTGATGATTTTGATCCAAGTGGAAAATTGCCAGGATCGTTTGATGATGGTGATCCACAAACTACAAATCTATATGTTGGAAATCTCTCTCCAAAGGTTGATGAAAATTTTCTTCTCCGAACTTTTGGAAGATTTGGACCCATTGCTAGTGTGAAGATAATGTGGCCTAGGACAGAGGAGGAGAGAAGGCGGCAAAGAAACTGTGGTTTTGTAGCTTTCATGAATAGAGCTGATGGACAGGCTGCTAAAGATGAAATGCAAGGAGTTGTGGTTTATGAATATGAATTGAAAATTGGGTGGGGTAAGTCTGTTGCTCTCCCATCGCAAGCACTACCTGCACCTCCACCAGGGCATATGGCCATCAGGAGTAAGGAGGGTGCCACTGTGATCTTGTCTGGTCCATCTGGTCCATCAGGTCCTCCAGTAACTTCTGTACCAAATCAGAACTCTGAACTGGTTCTTACTCCTAATGTTCCTGATATAATGGTTACACCTCCTGAAGATGAGCATCTAAGGCATGTGATTGATACCATGGCTTTGTATGTTTTGGATGGAGGATGTGCTTTTGAACAATCCATTATGGAGAGGGGCCGTGGCAACCCTCTTTTCAGTTTCTTGTTTGAGCTTGGCTCTAAGGAACATACTTACTATGTTTGGAGACTATACTCATTTGCTCAGATGGATTCCTCCCTCGTTACCCACAGCAAAAGTCCTGAACATGAAAAGGAGTCTGGTTCCACACATGCTGCAGGAAGAAGCAGGCGTGTGGAACCTGAAAGAACACTGACTGATGCACAAAGGGATGAGTTTGAGGATATGTTGCGTGCTTTAACATTAGAAAGGAGTCAAGTAAAAGAAGCTATGGGGTTTGCTTTGGATAATGCTGATGCAGCTGGAGAGATAGTTGAAGTTTTAACAGAATCCTTGACACTCAAAGAAACCCCTATTCCAACTAAAGTTGCAAGGCTCATGCTTGTCTCTGATGTGCTTCATAATAGCAGTGCTCCTGTAAGAAATGCATCTGCTTATCGTACTAAGTTTGAAGCAACATTGCCTGACATAATGGAGAGCTTTAATGACTTATATCGTAGCATAACAGGACGCATTACTGCTGAGGCCCTGAAGGAACGAGTGCTAAAAGTTCTTCAAGTGTGGGCAGATTGGTTTCTCTTTTCTGATGCTTATGTGAATGGCTTACGAGCCACATTCCTTCGATCTGGGAACTCTGGTGTCACGCTATTTCATTCCATCTGTGGAGATGCACCTGAAATTGAGAAAAATATGCATTCTGATGATACAGTTGATGGTGGCAAGAGCAACCAAGATTCTGCATTGGCAATGGGCCGAGGAGCTGCAATGAAGGAGCTAATGTCTCTTCCTCTTGCTGAGCTGGAAAGACGATGTCGACACAATGGATTATCGCTTGTTGGTGGTAGGGAAATGATGGTTGCACGTTTGCTTAGCCTGGAGGAGGCAGAAAAGCAAAGGGGTTATGAGCTAGATGATGAATTGAAATATGCTCAGAACCAAGCAAGTTCTGGGAGACATTCAAGTAGTCTGAGAGAAACAAGCTCTGAGCCTGAACCAGTGGGTTTCTCTGGGTGGAACCATTATGGGGAGGATGATTTACCCTTGCAAGGCAAAGCCTCAGTATCCCTGGCACAAACTTTGCCCATTCCTCACCCTGAATTGAAAGCCTTCACAAAAAAAGAGAAGAATGATCCAGTTTTACCAGCATCCAAATGGGCTCGTGAGGATGATGAGAGTGATGATGAACAAAAGGGTCATGGAAAGGGTTTGGGTTTAAGCTACTCATCTTCTGGTAGCGAGAATGCTGGTGATGGTACTATTAAGGCAGATGAGTTGGAGTCTGCTGCTGATACAAGCATCTCCACACAGACTGATAGTGGAATGAATGAAGAGCAGAGACAGAAGTTGAGGCGCCTGGAGAGAGGGGGAATTAAAAATTTGGAGGAAATTGAGAGAAAAGTTACACTGCACCGTAAACGGCTGCAAGCGGAGTTTGGATTATCAGATTCTGGAGAAGATGGTCAGGGACATAGAAGATCATCTTTGGAGAGGAGGGATAGACGAGATGATCCCCATGATGTCTCAAGAAAACGTCATCGTAGCCGTAGTCGAAGTCATAGTCCTCAACGAAAACCATCAGGCAGAGACAGGGACAGGGAACATGATGCAGACAGGGACCGAGATAGACAGAGAGATAGAGGAGGTTATGATTTTGATTGTGATAGAGGCAGGGACAGGGAGAAAAGTGGAAGCAGAGAGAGGGATGATCATGAGAGGGAGAGAGGCAGAGATAGGGATCGGAGGAGACGGGTAAAATAA 2826 0.448 MKEGNPHATSRQSAYYFAVSPTRRRTKPKRGRRTKPSTYAKMSSFSITRKKTPFQKHREEEEAKKKSKDGVSGPKKGSRYVPSFIPPPLATKGKESEKKKEEEKPKEKEKEKGKSRNIDNFMEELKHEQEMRERRNQEREHWRDGRNVEHSTISRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGPSGPSGPPVTSVPNQNSELVLTPNVPDIMVTPPEDEHLRHVIDTMALYVLDGGCAFEQSIMERGRGNPLFSFLFELGSKEHTYYVWRLYSFAQMDSSLVTHSKSPEHEKESGSTHAAGRSRRVEPERTLTDAQRDEFEDMLRALTLERSQVKEAMGFALDNADAAGEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVRNASAYRTKFEATLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRSGNSGVTLFHSICGDAPEIEKNMHSDDTVDGGKSNQDSALAMGRGAAMKELMSLPLAELERRCRHNGLSLVGGREMMVARLLSLEEAEKQRGYELDDELKYAQNQASSGRHSSSLRETSSEPEPVGFSGWNHYGEDDLPLQGKASVSLAQTLPIPHPELKAFTKKEKNDPVLPASKWAREDDESDDEQKGHGKGLGLSYSSSGSENAGDGTIKADELESAADTSISTQTDSGMNEEQRQKLRRLERGGIKNLEEIERKVTLHRKRLQAEFGLSDSGEDGQGHRRSSLERRDRRDDPHDVSRKRHRSRSRSHSPQRKPSGRDRDREHDADRDRDRQRDRGGYDFDCDRGRDREKSGSRERDDHERERGRDRDRRRRVK 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph7g1900 941 MobiDBLite consensus disorder prediction 92 120 - -
Enph7g1900 941 SMART rrm1_1 182 258 IPR000504 GO:0003723
Enph7g1900 941 ProSiteProfiles SAP motif profile. 615 649 IPR003034 -
Enph7g1900 941 MobiDBLite consensus disorder prediction 393 420 - -
Enph7g1900 941 MobiDBLite consensus disorder prediction 878 934 - -
Enph7g1900 941 Coils Coil 426 446 - -
Enph7g1900 941 ProSiteProfiles CID domain profile. 421 566 IPR006569 -
Enph7g1900 941 Pfam Surp module 331 383 IPR000061 GO:0003723|GO:0006396
Enph7g1900 941 MobiDBLite consensus disorder prediction 666 689 - -
Enph7g1900 941 MobiDBLite consensus disorder prediction 723 941 - -
Enph7g1900 941 CDD cwf21_RRC1-like 797 835 IPR047491 -
Enph7g1900 941 Gene3D - 797 837 - -
Enph7g1900 941 CDD RRM_SR140 180 263 IPR035009 -
Enph7g1900 941 Pfam CID domain 428 556 IPR006569 -
Enph7g1900 941 MobiDBLite consensus disorder prediction 52 73 - -
Enph7g1900 941 Coils Coil 813 833 - -
Enph7g1900 941 SUPERFAMILY Surp module (SWAP domain) 307 387 IPR035967 GO:0003723|GO:0006396
Enph7g1900 941 Gene3D - 421 568 IPR008942 -
Enph7g1900 941 MobiDBLite consensus disorder prediction 799 865 - -
Enph7g1900 941 SMART surpneu2 331 385 IPR000061 GO:0003723|GO:0006396
Enph7g1900 941 MobiDBLite consensus disorder prediction 666 697 - -
Enph7g1900 941 SMART 558neu5 428 563 IPR006569 -
Enph7g1900 941 MobiDBLite consensus disorder prediction 1 120 - -
Enph7g1900 941 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 181 262 IPR000504 GO:0003723
Enph7g1900 941 Gene3D - 89 264 IPR012677 -
Enph7g1900 941 Gene3D Surp module 319 389 IPR035967 GO:0003723|GO:0006396
Enph7g1900 941 MobiDBLite consensus disorder prediction 723 756 - -
Enph7g1900 941 SUPERFAMILY ENTH/VHS domain 425 564 IPR008942 -
Enph7g1900 941 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 183 255 IPR000504 GO:0003723
Enph7g1900 941 Coils Coil 118 138 - -
Enph7g1900 941 ProSiteProfiles SURP motif repeat profile. 333 376 IPR000061 GO:0003723|GO:0006396
Enph7g1900 941 SUPERFAMILY RNA-binding domain, RBD 174 261 IPR035979 GO:0003676
Enph7g1900 941 PANTHER RNA PROCESSING PROTEIN LD23810P 70 874 - -
Enph7g1900 941 MobiDBLite consensus disorder prediction 784 798 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph7g1900 178 258 Eukaryotic Initiation Factors Gene Family AT1G71770 32.099 2.71e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph7g1900 K12842 - gmx:100776093 1342.02