Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph7g1640 ATGCAGGCAACCACAGCTGACGTGGAGGCGGTGGACTTTGAGCCTGAGGAAGATGACTTGATGGACGATGACGGCGGTGCCGACTCTCCTCGTGCCCCTCCCCTTCCTAAGCTCAAATCTGCCATCACCGGCGGCGGCGCTTCTTCCTCACTTGTCGCCCCTAAGAAGACCAAAGGCCGCGGTTTTCGTGAAAATTCCGACGCCGATCGTAATGGTCGTTTTTCTGGCTCCGGCTTTGATTCTCTTACTACCGAGGGTGGCCCTGGTCCTCAACGATCAATTGAAGGATGGATTATTTTGGTCACCAGGCTGCATGAAGAGGCACAAGAAGATGACTTGGTAAATGCGTTTGGTGAATATGGAGAGATTAAAAATCTGCATTTGAATCTTGATCGTCGCACTGGTTTTGTCAAGGGCTATGCTCTGATTGAATATGAACATGCTGAGGAAGCCCGGAATGCAATAGAGAATTTGAATGGATCTGAGCTTCTTACGCAAACCATTTATGTTGATTGGGCCTTCAGCAGAGGACCTATTAATGGGTCTATCAGGAGAAAGAATGCTAGACCACAGCGGGAGCGACGCTCAAGGAGTCCTCGGAGGAGGTTTTGA 612 0.5016 MQATTADVEAVDFEPEEDDLMDDDGGADSPRAPPLPKLKSAITGGGASSSLVAPKKTKGRGFRENSDADRNGRFSGSGFDSLTTEGGPGPQRSIEGWIILVTRLHEEAQEDDLVNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYEHAEEARNAIENLNGSELLTQTIYVDWAFSRGPINGSIRRKNARPQRERRSRSPRRRF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph7g1640 203 SMART rrm1_1 98 171 IPR000504 GO:0003723
Enph7g1640 203 SUPERFAMILY RNA-binding domain, RBD 90 201 IPR035979 GO:0003676
Enph7g1640 203 MobiDBLite consensus disorder prediction 182 203 - -
Enph7g1640 203 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 168 IPR000504 GO:0003723
Enph7g1640 203 MobiDBLite consensus disorder prediction 188 203 - -
Enph7g1640 203 MobiDBLite consensus disorder prediction 10 24 - -
Enph7g1640 203 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 175 IPR000504 GO:0003723
Enph7g1640 203 MobiDBLite consensus disorder prediction 1 90 - -
Enph7g1640 203 CDD RRM_RBM8 91 178 IPR033744 GO:0003729
Enph7g1640 203 PANTHER RNA-BINDING PROTEIN 8A 7 202 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Enph7g1640 203 PRINTS RNA binding motif protein 8 family signature 51 63 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Enph7g1640 203 PRINTS RNA binding motif protein 8 family signature 144 160 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Enph7g1640 203 PRINTS RNA binding motif protein 8 family signature 88 102 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Enph7g1640 203 PRINTS RNA binding motif protein 8 family signature 162 174 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Enph7g1640 203 FunFam RNA-binding protein 8A 39 188 - -
Enph7g1640 203 Gene3D - 47 185 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph7g1640 Enph-Chr7 21609172 21613549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph7g1640 99 176 Eukaryotic Initiation Factors Gene Family AT3G11400 30.769 2.35e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph7g1640 K12876 - gmx:100527187 284.263