LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph7g1289	ATGGCTCATCTCTCCACCGATTCCCCCCTTGCTCGTCGCATAGTTCGTTCTTTCTTGGACTTCCTCAACTCTGTTGAACCGGCCCCTGGCGTTGATGTAGAAGGGTTGGAGGTCGCCAGGGAGTGTTTGACCGAGGTTTTTAAGCTGAACACATCTTCGACTGATGTTCATGCAAAATCTGATTCTTTGGTTGACATATTCAAGTCCCTTGAATCAAGCAAGCAATGTGAACCCAGTAAGTCCGATGTTGGTAAACAACCAGATGATATGGATGCTTCGAGTTCACTCACTGCCCACAATGGCGCTCATACACAAAAACATTCGGAGGCACGAGTTTCTAAAGATGAACTGTGTGGGCAATTCTTTCATGCTCTAGAGAAAGTCCACTTCTTCAGGACAAACCCTGATGGAAGTGATGACCCATTGCAACTGGAGAAAGCATCTCGTATGTTCAATGATGCTCTAATGGAGATGGAAAGATCTGAATATCAGGAGTTTAGTTTGAAATACTTGGCTGAATTGCTGAAGTCACAAGGTAATAAGGCAATGCAATCAAAGCAATACCCTGATGCAATCGAGTTGTATAACTGTGCAATTGCACTATGTGAAGATAATGCTGTTTACTACTGCAACAGGGCAGCTGCTTATACTCAGATCCACAAATACGCAGAAGCAATCCAAGATTGCCTTAAATCTATTGAGATTGACCCAAATTATAGCAAGGCATACAGTCGCCTGGGTTTAGCATATTATGCTCAGGGAAACTACCGTGATGCTATTGATAAAGGGTTTAGCAAAGCCTTGCAACTGGATCCAAATAATGAGTCTGTGAAAGAAAATATACGGGTTGCTGAGCAAAAATTGATAGAAGAACAACATCGTGCTGATCACAGTCAGAATTCAAGATCATCTCAGGAGTCTCAGAATCAGTCTTCACCAGGGTCTCTACCACCATTCAACTCAATGCCGTTTAATGCCAATGATCTTGCAAGCATGTTTATGAACATAGCTGCAAACGCTGCCAATGCGTATCAAGGAGAGCATCCTCAAGAACGGCAAGAAGATAGCAATACCAGTTCATTTAGTGAACCTGAGATTAGAATCGGGAGCAATATTAATTTAAACCTTAACCAAATGCCTGAGGATCTGACGGGGGGCTTTCAGGTCTGTGATGGAAATGTTATCTGCGTCAGCGCCACCAGGCCCAGGGCAACCAGAAGATCACTCAAATGGACGACCTGCTCCAAACTAGGCAGTAGGCAGTTTTACTTCTAG	1275	0.4376	MAHLSTDSPLARRIVRSFLDFLNSVEPAPGVDVEGLEVARECLTEVFKLNTSSTDVHAKSDSLVDIFKSLESSKQCEPSKSDVGKQPDDMDASSSLTAHNGAHTQKHSEARVSKDELCGQFFHALEKVHFFRTNPDGSDDPLQLEKASRMFNDALMEMERSEYQEFSLKYLAELLKSQGNKAMQSKQYPDAIELYNCAIALCEDNAVYYCNRAAAYTQIHKYAEAIQDCLKSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFSKALQLDPNNESVKENIRVAEQKLIEEQHRADHSQNSRSSQESQNQSSPGSLPPFNSMPFNANDLASMFMNIAANAANAYQGEHPQERQEDSNTSSFSEPEIRIGSNINLNLNQMPEDLTGGFQVCDGNVICVSATRPRATRRSLKWTTCSKLGSRQFYF	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph7g1289	424	Coils	Coil	274	294	-	-
	Enph7g1289	424	MobiDBLite	consensus disorder prediction	301	321	-	-
	Enph7g1289	424	Pfam	Homodimerisation domain of SGTA	12	68	IPR032374	-
	Enph7g1289	424	Gene3D	Tetratricopeptide repeat domain	169	323	IPR011990	GO:0005515
	Enph7g1289	424	MobiDBLite	consensus disorder prediction	75	110	-	-
	Enph7g1289	424	MobiDBLite	consensus disorder prediction	88	103	-	-
	Enph7g1289	424	Gene3D	Immunoglobulin FC, subunit C	4	74	-	-
	Enph7g1289	424	ProSiteProfiles	TPR repeat profile.	240	274	IPR019734	GO:0005515
	Enph7g1289	424	Pfam	Tetratricopeptide repeat	206	239	IPR001440	GO:0005515
	Enph7g1289	424	Pfam	Tetratricopeptide repeat	241	274	IPR013105	-
	Enph7g1289	424	MobiDBLite	consensus disorder prediction	344	364	-	-
	Enph7g1289	424	MobiDBLite	consensus disorder prediction	292	321	-	-
	Enph7g1289	424	ProSiteProfiles	TPR repeat profile.	206	239	IPR019734	GO:0005515
	Enph7g1289	424	FunFam	Tetratricopeptide repeat (TPR)-like superfamily protein	167	317	-	-
	Enph7g1289	424	SUPERFAMILY	TPR-like	172	285	IPR011990	GO:0005515
	Enph7g1289	424	SMART	tpr_5	240	274	IPR019734	GO:0005515
	Enph7g1289	424	SMART	tpr_5	206	239	IPR019734	GO:0005515
	Enph7g1289	424	SMART	tpr_5	172	205	IPR019734	GO:0005515
	Enph7g1289	424	PANTHER	LD24721P	1	387	IPR047150	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph7g1289	Enph-Chr7	18410688	18420317	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph7g1289	171	270	U-box Gene Family	AT3G07370	32.000	6.63e-09	55.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph7g1289	K16365		-	gmx:100799770	509.99