Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph7g1042 ATGCAACAGAGGCTCAAGCTTCAGCAACAGCAGCAAGCCCTCATGCAGCAAGCCCTGCTTCAGCAACAGCAGATGTATCACCCCGGAATGCTAGCCGCTACTATGTCTCAGATGGAGCCTATTCCTAGCGGAAATCTGCCTCCTGGATTTGACACTTCTACATGCCGCAGTGTTTATGTAGGAAATATTCATGTAAATGTTACCGAAAAACTTCTTGCTGAAGTATTTCAGAGTGCTGGTCCTCTTGCTGGGTGCAAGCTGATAAGAAAAGAAAAGTCCTCATATGGTTTTGTGGATTACCATGATAGATCATCTGCAGCCCTTGCAATAATGACACTGCATGGACGCCAACTATATGCTCAGGCACTTAAGGTGAATTGGGCATATGCCAATACCCATAGGGAGGATACTTCAGGGCACTTCAATATATTTGTTGGTGATTTGAGTCCAGAGGTTACTGATGCAACTTTATTTGCATGCTTCTCAGTCTATCCTAGTTGTTCTGATGCAAAGGTTATGTGGGATGTCAAAACTGGTCGGTCAAAAGGATATGGTTTTGTTTCTTTCCGTGATCAGCAGGATGCTCAAAGTGCCATCAATGATATGACTGGTAAGTGGCTGGGAAATAGGCAAATACGATGCAACTGGGGAACCAAGGGTGCTGGTATGAATACCAATGAGGAGAAGAACAATGATTCCCAAAATGCTGTCGTGCTTGCAAATGGATCTTCAGACGGAGGTCAGGAATACAACAATGAGGATGCCCCTGAAAACAGTCCTGCCTACACCACTGTTTATGTTGGCAACCTTCCCCATGATGTAACACAAACTGAACTCCACTATCAGTTCCATGCTTTGGAGGCTGGAGTTATTGAGGAGGTCCGAGTTCAAAGGGATAAAGGTTTTGGATTTGTAAGATACAACACTCATGAAGAAGCAGAGTTGGCCATTCAGATGGCTAATGGAAGAATACTTCGTGGGAAAACAATGAAGTGTTCATGGGGTAGCAAGCCAACTCCTCCTGGAACAGCTTCAAACCCACTACCTCCTCCTGCTCAACCTTATCAGATCCTTCCCACAACTGGGATGAACCAAGGCTATTCTCCTACTGAGTTATTGGCTTATCAGCGCCAATTGGCCTTAAGTCAGGCTGCTGTATCTGGTCTTTCAGGTCAAGCTCTTGTGCATATGACTGGTCAACACAGCCTAGCGGCTGCCTCTATTGGCTTAAGCTCCGGGGGATCCCAAGCCATGTATGATGCATATTCTGGTAATTCTTCAAGGCAGCACCTCATGTACTATCGTTAA 1308 0.4549 MQQRLKLQQQQQALMQQALLQQQQMYHPGMLAATMSQMEPIPSGNLPPGFDTSTCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKEKSSYGFVDYHDRSSAALAIMTLHGRQLYAQALKVNWAYANTHREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAKVMWDVKTGRSKGYGFVSFRDQQDAQSAINDMTGKWLGNRQIRCNWGTKGAGMNTNEEKNNDSQNAVVLANGSSDGGQEYNNEDAPENSPAYTTVYVGNLPHDVTQTELHYQFHALEAGVIEEVRVQRDKGFGFVRYNTHEEAELAIQMANGRILRGKTMKCSWGSKPTPPGTASNPLPPPAQPYQILPTTGMNQGYSPTELLAYQRQLALSQAAVSGLSGQALVHMTGQHSLAAASIGLSSGGSQAMYDAYSGNSSRQHLMYYR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph7g1042 435 SUPERFAMILY RNA-binding domain, RBD 135 226 IPR035979 GO:0003676
Enph7g1042 435 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 143 213 IPR000504 GO:0003723
Enph7g1042 435 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 122 IPR000504 GO:0003723
Enph7g1042 435 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 265 331 IPR000504 GO:0003723
Enph7g1042 435 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 141 219 IPR000504 GO:0003723
Enph7g1042 435 SMART rrm1_1 57 126 IPR000504 GO:0003723
Enph7g1042 435 SMART rrm1_1 264 333 IPR000504 GO:0003723
Enph7g1042 435 SMART rrm1_1 142 215 IPR000504 GO:0003723
Enph7g1042 435 SUPERFAMILY RNA-binding domain, RBD 40 134 IPR035979 GO:0003676
Enph7g1042 435 Gene3D - 1 138 IPR012677 -
Enph7g1042 435 FunFam Nucleolysin TIAR-like protein 140 238 - -
Enph7g1042 435 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 44 340 - -
Enph7g1042 435 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 130 IPR000504 GO:0003723
Enph7g1042 435 FunFam Nucleolysin TIAR-like protein 1 139 - -
Enph7g1042 435 SUPERFAMILY RNA-binding domain, RBD 252 346 IPR035979 GO:0003676
Enph7g1042 435 Gene3D - 241 341 IPR012677 -
Enph7g1042 435 Gene3D - 139 238 IPR012677 -
Enph7g1042 435 SMART rrm2_1 142 215 IPR003954 GO:0003676
Enph7g1042 435 SMART rrm2_1 264 333 IPR003954 GO:0003676
Enph7g1042 435 FunFam Oligouridylate-binding protein 1C 240 341 - -
Enph7g1042 435 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 263 337 IPR000504 GO:0003723
Enph7g1042 435 CDD RRM2_PUB1 140 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph7g1042 Enph-Chr7 16102717 16109304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph7g1042 57 337 Eukaryotic Initiation Factors Gene Family AT1G22760 24.830 7.59e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph7g1042 K13201 - gmx:100777108 776.163