Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph7g1038 ATGATTCTCAATTCTGAAGAGGAAAGAACACCAATCATTTATAAAATTTTGCCGTGCTTGTTTCTGGTACCTAAGCCATCAAATTTCGTTAATCCTAGATCCTGTGCTGTTAATGCACGTTGCAAAAAGACTGAAACGATGTCTCGTGTGTATGTTGGTAACTTGGATTCGAGAGCTACTGAGAGAGATCTCGAAGATGAATTTCGTGTATTTGGAGTCATACGGAGTGTCTGGGTTGCAAGAAGACCACCTGGTTATGCTTTTGTTGATTTTGAGGACCGCAGAGATGCACAGGATGCCATTCGTGAATTAGATGGTAAGAATGGTTGGAGAGTGGAGCTTTCCCACAATTCTAAAGGTGGAGGTGGCCGTGGTCGCTCTGGTGGCTCTGATTTGAAATGTTATGAGTGTGGTGAGCCTGGTCATTTTGCTCGTGAATGTCGTGTGCGTGGTGGTTCAGGAAGACGTCGGAGCCGAAGTCCACCTCGATTCCGCAAGAGCCCCAGTTATGGGCGGAGGAACATTAAGACTTTACTTTCCAGAGACTTGATTTTAGTTAAAGGAGTTACAGTCCTCGAGGAGGTCGATCCCCTAGGCACCGGAGTTTGTCACCTCGTCGACGTAGCCATAGCAAATCACCTCCTTATCGTGGACGTGAGGAGCTACCATATACGAATGGAAACGGTGCAAGGGAACCGCGCCGCAGCAGAAGTTGAGTTTTGA 723 0.4689 MILNSEEERTPIIYKILPCLFLVPKPSNFVNPRSCAVNARCKKTETMSRVYVGNLDSRATERDLEDEFRVFGVIRSVWVARRPPGYAFVDFEDRRDAQDAIRELDGKNGWRVELSHNSKGGGGRGRSGGSDLKCYECGEPGHFARECRVRGGSGRRRSRSPPRFRKSPSYGRRNIKTLLSRDLILVKGVTVLEEVDPLGTGVCHLVDVAIANHLLIVDVRSYHIRMETVQGNRAAAEVEF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph7g1038 240 SMART c2hcfinal6 133 149 IPR001878 GO:0003676|GO:0008270
Enph7g1038 240 SUPERFAMILY RNA-binding domain, RBD 45 128 IPR035979 GO:0003676
Enph7g1038 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 119 IPR000504 GO:0003723
Enph7g1038 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 107 IPR000504 GO:0003723
Enph7g1038 240 Pfam Zinc knuckle 133 148 IPR001878 GO:0003676|GO:0008270
Enph7g1038 240 ProSiteProfiles Zinc finger CCHC-type profile. 133 148 IPR001878 GO:0003676|GO:0008270
Enph7g1038 240 FunFam Serine/arginine-rich splicing factor RSZ22A 130 177 - -
Enph7g1038 240 CDD RRM_SRSF3_like 49 117 - -
Enph7g1038 240 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 48 171 - -
Enph7g1038 240 SMART rrm1_1 49 115 IPR000504 GO:0003723
Enph7g1038 240 FunFam Serine/arginine-rich splicing factor 7 48 115 - -
Enph7g1038 240 Gene3D - 41 119 IPR012677 -
Enph7g1038 240 Gene3D - 128 177 - -
Enph7g1038 240 MobiDBLite consensus disorder prediction 148 170 - -
Enph7g1038 240 SUPERFAMILY Retrovirus zinc finger-like domains 126 149 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph7g1038 Enph-Chr7 16055062 16060390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph7g1038 40 106 Eukaryotic Initiation Factors Gene Family AT2G36660 35.211 5.67e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph7g1038 K12896 - gmx:100796961 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph7g1038 7 16055062 16060390 Enph7g1038 7 16055062 16060390 ECH