LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph7g0271	ATGCCAGCTTTCCCTTTCGTCCATGCCCTGTCTCTCTTGAGCTCTCAAGGGAAGTCCATGGAAATCTCACTTGCTCTGTTCATTACACTTGCAATTCTACTTGCTTTCTCTTCAACAGCCACCTCGCATTACTCCTTCTCCCCTTCTTCTTCTCCACCTGCTTCTTCTCTGCAATCTTCATCTTCCCCTTCGCTCTCCGAATGGCAGTCTGCGCGCGCCACTTACTACGCCGCTGCAGATCCTAGGGACGCGGTTGGGGGCGCGTGCGGCTATGGTGACCTTATCAAAGCTGGTTACGGAATGGGCACCGCGGGTCTCAGTGAGTCGCTCTTTGAACGTGGCCAGATCTGTGGTGCCTGCTTCGAGCTCCGGTGCGTGGATGACCTTCGCTGGTGTATCCCCGGAACCTCCATTATCGTCACTTCCACGAACTTCTGTGCGCCCAACTATGGCTTCACCGCCGAAGGAGGTGGCCGCTGTAACCCTCCCAACAAGCATTTCGTGCTCCCAATTGAAGCCTTCGAGAAGATCGCAATTTGGAAAGCCGGCAACATGCCGATCCAGTATCGGAGGATAAAGTGCCGGAAGCAAGGAGGAATGCGTTTTACAATCACTGGTTCTGGCATTTATATTTCAGTGCTGATCAGCAATGTAGCTGGCGTGGGAGACATTGTGGCCGTGAAGGTCAAGGGCTCAAGAACTGGTTGGCTTCCCAATGGGTCGGAATTGGGGCCAAAACTGGCATGTAAATGCGTTACTACAGAATCAACCTCTTTCATTTGA	783	0.5275	MPAFPFVHALSLLSSQGKSMEISLALFITLAILLAFSSTATSHYSFSPSSSPPASSLQSSSSPSLSEWQSARATYYAAADPRDAVGGACGYGDLIKAGYGMGTAGLSESLFERGQICGACFELRCVDDLRWCIPGTSIIVTSTNFCAPNYGFTAEGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPIQYRRIKCRKQGGMRFTITGSGIYISVLISNVAGVGDIVAVKVKGSRTGWLPNGSELGPKLACKCVTTESTSFI	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph7g0271	260	SUPERFAMILY	Barwin-like endoglucanases	67	217	IPR036908	-
	Enph7g0271	260	Pfam	Expansin C-terminal domain	200	239	IPR007117	-
	Enph7g0271	260	CDD	DPBB_EXPA_N	67	194	-	-
	Enph7g0271	260	Gene3D	-	52	195	IPR036908	-
	Enph7g0271	260	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	86	199	IPR007112	-
	Enph7g0271	260	PRINTS	Expansin signature	157	174	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	210	231	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	98	112	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	138	148	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	125	136	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	174	187	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin signature	198	210	IPR002963	GO:0009664
	Enph7g0271	260	PRINTS	Expansin/Lol pI family signature	85	103	IPR007118	GO:0005576
	Enph7g0271	260	PRINTS	Expansin/Lol pI family signature	67	82	IPR007118	GO:0005576
	Enph7g0271	260	PRINTS	Expansin/Lol pI family signature	107	125	IPR007118	GO:0005576
	Enph7g0271	260	PRINTS	Expansin/Lol pI family signature	182	198	IPR007118	GO:0005576
	Enph7g0271	260	Pfam	Lytic transglycolase	104	189	IPR009009	-
	Enph7g0271	260	PANTHER	EXPANSIN-A15	36	257	IPR002963	GO:0009664
	Enph7g0271	260	SMART	dpbb_1	103	189	IPR007112	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph7g0271	Enph-Chr7	8702254	8707963	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph7g0271	67	244	Expansin Gene Family	AT3G03220	82.584	1.61e-113	325

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph7g0271	-		-	csv:101206236	347.051