Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g1949 ATGGCGTGGTCAAATGGTGGTGGAGCCAGCTCGGCCCAGAAGTCGATTCGCTCTTCTCGGCCTATCTACGTTCCTCCTCACTGCAGGAACAATGGTAGTTTCAGCAATGCGAACTCGTTCATGTCTTCCAATGAGTCAGCTCAGTCTGGGTTTTTGTCTTCCAACCCATATGGCTCGAGACAACGAACTAGAGGTGGTTCAACTAATGGCCGTTTCGGTGGTCGCAGTCGCGGTCGCGGTAGAGGTCGGAGGTTTACTGCCCCGGAAGAGACTGATGAGTTGAACCCGTACCTGAATCGGGACGGTTCTGGGTTTATCACTTCAGATATTACTGCGGAAGATAGTAGTGGTTGTGTTATTAATTTTGATGCATATGAAGACATTCCGGTGGAGGTCAGTGGCTCAGATATACCCCCGCCAGTGAATACTTTCACAGAAATCGAGTTGAATGAGGGTTTGAATAAGAACATCAAGCGTTGCAAGTACGTCAAACCCACTCCGATTCAGCGTCATGCGATACCCATTGCCATTGCAGGTCGTGACTTGATGGCATGTGCGCAGACCGGGTCAGGGAAGACTGCAGCGTTCTGTTTTCCCATTATATCAGGGGTTTTGAAGGATCGTTCTGGATTTTTGGCTTCGGCTCGTGAAGGCAGAATCGCATATCCCACTGCGCTTATAATGTCACCAACTAGAGAATTGTCATGTCAGATTCATGATGAAGTCAAGAAGTTCGCTTATCAGACGGGACTGAAGAGTGTTGCTGCTTATGGTGGGGCCTCGATCGCTCAGCAGTTTCTCATTTTAGAAAGAGGAGTGGACATCTTAGTTGCAACTCCAGGGCGCTTAGTGGATATGATTGAGAGAGGCAGGGTTTCACTGACAAGAGTAAAATTTCTTGCACTTGATGAGGCGGACCGTATGTTGGACATGGGCTTTGAGCCTCAAATTCGGAAGATTGTTGAGCAAACGGATATGCCTCCAGCAGGTGCTAGACAGACTATGCTTTTCAGTGCTACATTTCCAGATGATATACAGAGGCTTGCAGTGGACTTTCTTTCGAACTACATATTCGTAGCAATTGGAAGAATTGGTTCCAGCACTCAACTGATTGTACAGAAAGTTGAACTTGTTGAGGATATGGAGAAAAGAGATCATCTTGTGGATCTTCTCCATTCTCAAAGGGTAGATGGGACAAATGGAAAGGAGAATTGGGATTTTGATACTGAATTGATTATTGCAACGCAGCAAGCTTTGACACTAGTATTTGTGGAAACAAAAAGAGGAGCAGATGCTTTAGAAAACTGGCTGTTGAGAAAAGGCTTTCCAGCTATTGCAATACATGGTGACAAAGTTCAAATGGAGAGAGAAAGAGCCTTGAGATCTTTCAAAAGTGGTGCTACTCCTATTTTGGTTGCAACTGATGTTGCTTCACGAGGCTTGGACATTCCCCATGTGGCTCATGTTGTCAATTTTGACTTGCCAAAAGATATAGACAACTATGTGCACAGGATTGGTCGAACTGGCCGTGCTGGAAAGTCTGGTTTGGCTACTGCTTTCTTCAGTGATAAAAACATCCCTCTTGCTAAGGCCCTTGCTGGACTCATGCTGGAATCAAACCAAAAGGTTCCCTCTTGGCTCACCCAATATGCAGAGTTTTCATCAGATGGTATTCATAGACAAAGGGGCCAGTGCAATGGTGGTGGCAAGTATGGCGGCCACGACTTTAGAACTGTGACTCAACATGAATCAGCGTATGACAACCACTACCATACGAATGTGAATGCAGGTTATGTAGAGAACTCTTATAGCGTAACTACAGCATATGACATCTCGAACTCTTACAGTGATTATTCTTCTCATGATATAGCAAACACACTTCCTCCTGCTAGCAGCAATTATCAGTATAATGAGGCTGACACTGGTTGTTATGGAAGTGGGAAGGCCGATGGGCCAAATGGATACATATCTGTTGTTGCTACTGGATGGGACTAG 1995 0.4561 MAWSNGGGASSAQKSIRSSRPIYVPPHCRNNGSFSNANSFMSSNESAQSGFLSSNPYGSRQRTRGGSTNGRFGGRSRGRGRGRRFTAPEETDELNPYLNRDGSGFITSDITAEDSSGCVINFDAYEDIPVEVSGSDIPPPVNTFTEIELNEGLNKNIKRCKYVKPTPIQRHAIPIAIAGRDLMACAQTGSGKTAAFCFPIISGVLKDRSGFLASAREGRIAYPTALIMSPTRELSCQIHDEVKKFAYQTGLKSVAAYGGASIAQQFLILERGVDILVATPGRLVDMIERGRVSLTRVKFLALDEADRMLDMGFEPQIRKIVEQTDMPPAGARQTMLFSATFPDDIQRLAVDFLSNYIFVAIGRIGSSTQLIVQKVELVEDMEKRDHLVDLLHSQRVDGTNGKENWDFDTELIIATQQALTLVFVETKRGADALENWLLRKGFPAIAIHGDKVQMERERALRSFKSGATPILVATDVASRGLDIPHVAHVVNFDLPKDIDNYVHRIGRTGRAGKSGLATAFFSDKNIPLAKALAGLMLESNQKVPSWLTQYAEFSSDGIHRQRGQCNGGGKYGGHDFRTVTQHESAYDNHYHTNVNAGYVENSYSVTTAYDISNSYSDYSSHDIANTLPPASSNYQYNEADTGCYGSGKADGPNGYISVVATGWD 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g1949 664 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 110 551 - -
Enph6g1949 664 FunFam Probable ATP-dependent RNA helicase DDX4 107 361 - -
Enph6g1949 664 MobiDBLite consensus disorder prediction 29 70 - -
Enph6g1949 664 SMART ultradead3 161 374 IPR014001 -
Enph6g1949 664 Pfam Helicase conserved C-terminal domain 414 512 IPR001650 -
Enph6g1949 664 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 142 170 IPR014014 GO:0003724
Enph6g1949 664 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 173 359 IPR014001 -
Enph6g1949 664 FunFam ATP-dependent RNA helicase RhlB 362 554 - -
Enph6g1949 664 Gene3D - 361 554 IPR027417 -
Enph6g1949 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 529 IPR027417 -
Enph6g1949 664 CDD SF2_C_DEAD 371 521 - -
Enph6g1949 664 Gene3D - 108 360 IPR027417 -
Enph6g1949 664 CDD DEADc_DDX3_DDX4 143 365 IPR044763 GO:0003724|GO:0005524
Enph6g1949 664 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 406 551 IPR001650 -
Enph6g1949 664 MobiDBLite consensus disorder prediction 1 18 - -
Enph6g1949 664 Pfam DEAD/DEAH box helicase 166 348 IPR011545 GO:0003676|GO:0005524
Enph6g1949 664 SMART helicmild6 431 512 IPR001650 -
Enph6g1949 664 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g1949 Enph-Chr6 23964289 23969408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g1949 124 532 Eukaryotic Initiation Factors Gene Family AT3G19760 30.900 6.47e-60 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g1949 K11594 - qsa:O6P43_023075 736.102