Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph6g1885 | ATGGGACGCGTTCGTACGAAGACCGTGAAGAAGTCGTCACGACAAGTCATCGAGAGGTACTATTCTCGAATGACCTTAGATTTCCACACCAACAAGAAGATTCTTGAGGAGGTGGCCCTCATACCTTCCAAGAGACTCCGCAACAAGATCGCCGGCTTCTCTACGCATCTTATGAAGAGGATCCAGAAGGGCTCTGTTCGCGGTATCTCCCTCAAGCTGCAGGAGGAGGAGCGCGAGCGTCGTATGGATTTTGTACCTGATGTTTCCGCCATTAAGACTGATCAAATTGAGGTCGACAAGGAGACGCTTGACATGCTTAGTGCTCTGGGCATGAATGATGTTCCCGGTCTTGTTCAAGTTGATCCCGTGCCTGTTCAGCAGGTCGGATTTGGTCGGGGTGGTTTTGGTGGGGCTGGTAGGAGATTGCAATCTTTAAACCTTGTTATTGTTGTACTTGAGTTCAGAATGATGGAGAAATTTAATGCTCCATGTGAGGTACCCGTGCACTTCACTGATGCAGGATTGTATGGTGCAGCAAGGGTGAGCCATGCTCCCCAAGTCTCACAGCACTTGGGAAAATCCTGA | 585 | 0.4957 | MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLSALGMNDVPGLVQVDPVPVQQVGFGRGGFGGAGRRLQSLNLVIVVLEFRMMEKFNAPCEVPVHFTDAGLYGAARVSHAPQVSQHLGKS | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph6g1885 | 194 | ProSitePatterns | Ribosomal protein S17e signature. | 41 | 56 | IPR018273 | GO:0003735|GO:0005840|GO:0006412 | |
| Enph6g1885 | 194 | Gene3D | - | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
| Enph6g1885 | 194 | Pfam | Ribosomal S17 | 1 | 120 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
| Enph6g1885 | 194 | Hamap | 30S ribosomal protein S17e [rps17e]. | 1 | 63 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
| Enph6g1885 | 194 | FunFam | 40S ribosomal protein S17 | 1 | 62 | - | - | |
| Enph6g1885 | 194 | SUPERFAMILY | Rps17e-like | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
| Enph6g1885 | 194 | PANTHER | 40S RIBOSOMAL PROTEIN S17 | 1 | 123 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph6g1885 | Enph-Chr6 | 22194522 | 22196165 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph6g1885 | 1 | 133 | Cytoplasmic Ribosomal Protein Gene Family | AT5G04800 | 81.022 | 5.30e-77 | 225 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph6g1885 | K02962 | - | twl:120012961 | 217.238 |