Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g1219 ATGGCAGCTTCTGCAGCTGCTGCTATAGGCTCTTCCTTCTCTTCATCCATCAACACCCTCAAGTGTCTTCGTTCTTCCAGGAACCTGTCTTCTGAACTCTTCCTCAGAATTTCATCAAACCGCGTGTTCATGTCAGTGTCACAATTGCACTTGGTGGAACCCCTTTCATTTGATAGTAATGCTCACAATTTGTGGGTGTCTAGGGTTTCTGTGCAAGAAGAGCTTGTAATGGCCGATGAGATTGATTCTGGTTTAGTTGAAGAGAATAAGGAACAAGGAAAGGAAGTGGCAGAAGAAGGAGAGGCTGACGTCTCTGTCAACAGCAAGCTATATTTTGGGAACTTGCCTTACAGTGTTGATAGCGCACAACTTGCAGGAATAATTCAGGATTATGGTTGTCCAGAACTCATTGAGGTTCTTTACAACAGGGATACTGGAAAAAGCAGAGGTTTTGCATTTGTTACAATGAGCAGTGTTGAAGATTGTAATGCAGTAATAGAAAATCTTGATGGAACTGAATACTTGGGTCGAACCCTGCGGGTGAACTTCTCTGACAAACCTAAACCAAAAGAACCCTTGTACCCTGAAACGGAACATAAGCTTTTTGTTGGGAACTTGTCATGGTCTGTAACTTCTGAGAGTCTGACAGAAGCTTTTGAAGAATATGGAAAAGTGGTTGGAGCTAGGGTCTTATATGATGGTGAAACAGGAAGATCTCGTGGTTATGGCTTTGTTTGCTATTCAAACAAATCAGAAATGGAAGCTGCTCTTTCATCCTTGAATGGAGTGGAACTGGAAGGACGAGCAATGCGAGTAAGCTTGGCTGAAGGCAAAAAATCACAAGGTGAATAG 852 0.4272 MAASAAAAIGSSFSSSINTLKCLRSSRNLSSELFLRISSNRVFMSVSQLHLVEPLSFDSNAHNLWVSRVSVQEELVMADEIDSGLVEENKEQGKEVAEEGEADVSVNSKLYFGNLPYSVDSAQLAGIIQDYGCPELIEVLYNRDTGKSRGFAFVTMSSVEDCNAVIENLDGTEYLGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFEEYGKVVGARVLYDGETGRSRGYGFVCYSNKSEMEAALSSLNGVELEGRAMRVSLAEGKKSQGE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g1219 283 FunFam 28 kDa ribonucleoprotein, chloroplastic 190 281 - -
Enph6g1219 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 201 270 IPR000504 GO:0003723
Enph6g1219 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 180 IPR000504 GO:0003723
Enph6g1219 283 SUPERFAMILY RNA-binding domain, RBD 194 280 IPR035979 GO:0003676
Enph6g1219 283 Gene3D - 71 188 IPR012677 -
Enph6g1219 283 FunFam 31 kDa ribonucleoprotein, chloroplastic 71 189 - -
Enph6g1219 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 199 277 IPR000504 GO:0003723
Enph6g1219 283 PANTHER OS02G0815200 PROTEIN 45 278 - -
Enph6g1219 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 108 186 IPR000504 GO:0003723
Enph6g1219 283 CDD RRM2_NsCP33_like 200 275 - -
Enph6g1219 283 Gene3D - 189 283 IPR012677 -
Enph6g1219 283 SMART rrm1_1 109 182 IPR000504 GO:0003723
Enph6g1219 283 SMART rrm1_1 200 273 IPR000504 GO:0003723
Enph6g1219 283 SUPERFAMILY RNA-binding domain, RBD 105 191 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g1219 Enph-Chr6 14739581 14746861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g1219 110 283 Eukaryotic Initiation Factors Gene Family AT3G16380 29.714 2.66e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g1219 - - cave:132178760 389.423