Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Enph6g1100 | ATGGCTCAGCTGCAGAGCCAGCAGCAGCCGCAGCCACCCATCGATCATGCCCAGAAGACCAAGACTCTCATTTGTGCTCTCAACCTTGTCTCCCGTAACCTCCCTCTGCCTCCTGATCTTTTCGACACCGTTTCTTCCATCTATAATGGCAGCGAAGATGCTTCCAGTAATAGCCGTGCCTGCAAGGTCCCTGATGGGAGAGCGGTTGGAGCCGGATCTGAGGAGAAACAGGTGGATGCCCCTGCTGACAAGGGTTTGGATGATGTAGGAGGTTCTAGAGAAGATTTGCTTACAGATCTTGAGGATGCACTCTTGAAGCAACGACCAAGTTGTGTGTCAGGTTCCAAATTGAAGGAAGAAAGGGAACACCGTTACCAAAGTCAGACTCAGCATCGATTAAATGATCTTGAAGGATTGCCTTCTAGCAGGGGAGAGGATCTGCAGGCAAAGTGCCTCCTTGAACTGTATGGATTGAAGCTGGCAGAGCTGCAGAGGAAGGTTCGGTCTGATGTGAGTGCTGAATATTGGCTCAATGTTAAATGTGCATATCCTAACAGGCAGTTGTTTGACTGGGGAATGATGAGGTTGCGTCGTCCTATGTATGGTGTTGGAGATCCATTTGCCATGGATGCTGATGATCAGTTAAGGAAGAAAAGGGATGCTGAGAGATTGTCAAAATTAGAAGAGGAGGAAAAGAATCACATAGAGACCAGAAAAAGAAAATTCTTTGCAGAAATACTTAATGCTGTCCGCGAGTTCCAATTACAAATTCAAGCTTCTTTGAAACGAAGAAAACAGAGAAATGATGGTGTCCAGGCATGGCATGGAAGGCAAAGGCAACGTGCAACACGGGCTGAGAAATTGAGGTTTCAAGCCTTAAAGGCTGATGATCAAGAAGCTTATATGAGAATGGTGAAAGAGAGTAAGAATGAGAGATTGACTTTACTTCTTGAAGAAACAAATAAGTTGCTCGTAAATTTGGGAGCAGCTGTTCAACGTCAAAAGGACTCAAAACAAACAGATGGCATCGAACCTTTGGAAGACTCAGAGGCTGATCTACTAGAGTCAGATGGTTCAAAGAATGGAATGTCCAAGGAATCACCTCTTGAGGAATATGCTCATATGATATATTCTGATCATAATGGTGACACTAGCGATTTACTTGAAGGTCAACGGCAATACAACTCTGCCATTCATTCAATTCAAGAAAAGGTCACTGAGCAACCTTCTACTCTTCAAGGTGGAGAGTTAAGACCATATCAACTAGAAGGGCTTCAGTGGATGCTTTCTTTGTTCAACAACAACCTAAATGGGATTTTGGCTGATGAAATGGGGCTGGGGAAGACAATACAAACAATTTCTTTGATAGCTTATCTTATTGAGAACAAGGGTGTTACTGGTCCGCATTTGATTGTGGCTCCAAAGGCTGTTCTGCCAAATTGGATCAGTGAATTCTCAACATGGGTTCCAAGCATTACAACAGTTCTTTATGATGGGCGGCAAGACGAGCGAAAAGCTATGAAGGAGGAATTGTCAGGAGAGGGGAAGTTTAATGTTCTGATAACACATTATGATCTTATAATGAGAGATAAGGCATTTCTCAAGAAAATTCACTGGTACTACTTGATTGTGGATGAAGGGCATCGGTTGAAGAATCATGAGTGTGCTCTAGCAAGAACCCTTGACTCTGGCTATCATATCCAACGCCGACTCCTGCTAACTGGCACCCCTATTCAGAACAGTTTGCAGGAATTGTGGTCCCTTCTTAATTTTCTCCTTCCAAGCATTTTTAATTCAGTTCAAAATTTCGAGGACTGGTTTAATGCCCCCTTTGCAGACCGAGTTGATGTCTCTCTAACAGATGAAGAACAGCTATTGATCATTCGCCGTCTGCATCAAGTAATAAGACCCTTTATATTAAGAAGGAAGAAAGATGAGGTGGAAAAATATCTTCCAGGGAAATCTCAGGTCATACTCAAATGTGATATGTCATCATGGCAGAAAGTATATTATCAACAAGTTACTGACTTGGGCAGAGTTGGCTTGGACAATGGCACTGGGAAATCAAAAAGTCTACAGAATTTAACAATGCAACTCAGAAAGTGTTGTAACCATCCCTACCTTTTTGTGGGAGAACATAATATGTGGAACAAGGATGAGATTGTCAGAGCATCTGGGAAGTTTGAACTCCTTGACCGGCTGCTCCCAAAACTTCGTAGAACTGGGCACAGGGTTCTTCTGTTCTCACAAATGACTCGGCTCATGGATACTCTTGAAATTTATCTGCGACTGCATGATTTTAAGTTTCTTAGACTTGATGGCTCAACAAAAACTGAGGAAAGAGGGTCTCTACTGCGACAATTCAATGCTCCTGACTCTCCATACTTTATGTTTCTTTTAAGCACCCGTGCAGGAGGCCTTGGTCTAAACCTGCAAACAGCAGATACGGTTATAATTTTTGATAGTGATTGGAACCCTCAAATGGATCAACAAGCTGAGGATCGAGCTCATCGAATTGGACAAAAAAAAGAAGTCAGGGTTTTTGTGTTGGTTAGTGTGGGATCAATTGAAGAGGTGATTTTGGAGCGTGCAAAACAAAAGATGGGCATAGATGCTAAAGTCATCCAGGCGGGACTCTTTAACACAACTTCGACAGCTCAGGACAGAAGAGAAATGCTGGAGGAGATTATGCGCAGAGGCACAAGCTCACTTGGGACTGATGTACCAAGTGAGAGAGAAATCAATCGCCTTGCAGCTCGGACAGATGAAGAATTTTGGTTGTTTGAAAGAATGGATGAAGAGAGAAGGCAAAAGGAGAACTACCGATCTCGTCTCATGGAAGAACATGAAGTGCCTGATTGGGTATACTCCGCTGCAGCTAATAAGGATGATAAGGTTAAAGGTTTTGATGTTGGTAGCATTACTGGAAAACGAAAAAGAAAAGAAGTGGTATATGCAGATACATTAAGCGATCTACAATGGATGAAGGCTGTGGAGAATGGGGAAGACGTGTCAAAGCTTTCAGTTAAAGGAAGAAGAAGAGATCACCTGCCATCTGACAGCAATACAATCGCTGGAGATAATGGTGGGGCAGAAGAAAGTTTTTCTGAGTTACAGAATGAAAGCTTTTCCATGGCAAGAGAGAGATCAAGTGAAGATTCTTTCCATGTGACCCCTGGTTCTGCCCCAAAGAGACTCAGGCCTGAAGGAATAAATATGCAGAGACATGAATACGAGGGCATAAGAGGTAGTGGATTGAATGAGCATATGTTTTCCTGGAATACTCATAGAAAGAAAAGATCAAGCAATCTTGCTCAGAGCTCCTCGTTATCTGATTCTAGAGGGCAGAGTTCTAATGGAAGAGCAAATTGGAGCTGA | 3378 | 0.4304 | MAQLQSQQQPQPPIDHAQKTKTLICALNLVSRNLPLPPDLFDTVSSIYNGSEDASSNSRACKVPDGRAVGAGSEEKQVDAPADKGLDDVGGSREDLLTDLEDALLKQRPSCVSGSKLKEEREHRYQSQTQHRLNDLEGLPSSRGEDLQAKCLLELYGLKLAELQRKVRSDVSAEYWLNVKCAYPNRQLFDWGMMRLRRPMYGVGDPFAMDADDQLRKKRDAERLSKLEEEEKNHIETRKRKFFAEILNAVREFQLQIQASLKRRKQRNDGVQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQKDSKQTDGIEPLEDSEADLLESDGSKNGMSKESPLEEYAHMIYSDHNGDTSDLLEGQRQYNSAIHSIQEKVTEQPSTLQGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLIENKGVTGPHLIVAPKAVLPNWISEFSTWVPSITTVLYDGRQDERKAMKEELSGEGKFNVLITHYDLIMRDKAFLKKIHWYYLIVDEGHRLKNHECALARTLDSGYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKYLPGKSQVILKCDMSSWQKVYYQQVTDLGRVGLDNGTGKSKSLQNLTMQLRKCCNHPYLFVGEHNMWNKDEIVRASGKFELLDRLLPKLRRTGHRVLLFSQMTRLMDTLEIYLRLHDFKFLRLDGSTKTEERGSLLRQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGTSSLGTDVPSEREINRLAARTDEEFWLFERMDEERRQKENYRSRLMEEHEVPDWVYSAAANKDDKVKGFDVGSITGKRKRKEVVYADTLSDLQWMKAVENGEDVSKLSVKGRRRDHLPSDSNTIAGDNGGAEESFSELQNESFSMARERSSEDSFHVTPGSAPKRLRPEGINMQRHEYEGIRGSGLNEHMFSWNTHRKKRSSNLAQSSSLSDSRGQSSNGRANWS | 1125 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Enph6g1100 | 1125 | Gene3D | - | 648 | 947 | IPR027417 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 77 | 93 | - | - | |
Enph6g1100 | 1125 | Pfam | Snf2-ATP coupling, chromatin remodelling complex | 929 | 995 | IPR029295 | GO:0042393 | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 115 | 139 | - | - | |
Enph6g1100 | 1125 | SMART | helicmild6 | 756 | 840 | IPR001650 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 115 | 130 | - | - | |
Enph6g1100 | 1125 | Coils | Coil | 931 | 951 | - | - | |
Enph6g1100 | 1125 | FunFam | Probable ATP-dependent DNA helicase CHR12 | 648 | 946 | - | - | |
Enph6g1100 | 1125 | SMART | ultradead3 | 413 | 606 | IPR014001 | - | |
Enph6g1100 | 1125 | SMART | SnAC_2 | 933 | 995 | IPR029295 | GO:0042393 | |
Enph6g1100 | 1125 | FunFam | Chromatin structure-remodeling complex protein SYD | 408 | 651 | - | - | |
Enph6g1100 | 1125 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 429 | 595 | IPR014001 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 51 | 93 | - | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 1006 | 1069 | - | - | |
Enph6g1100 | 1125 | Pfam | SNF2-related domain | 420 | 708 | IPR000330 | GO:0005524|GO:0140658 | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 1006 | 1020 | - | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 1090 | 1125 | - | - | |
Enph6g1100 | 1125 | CDD | SF2_C_SNF | 718 | 851 | - | - | |
Enph6g1100 | 1125 | Coils | Coil | 211 | 231 | - | - | |
Enph6g1100 | 1125 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 644 | 894 | IPR027417 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 1021 | 1045 | - | - | |
Enph6g1100 | 1125 | Pfam | Helicase conserved C-terminal domain | 727 | 840 | IPR001650 | - | |
Enph6g1100 | 1125 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 393 | 642 | IPR027417 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 1097 | 1125 | - | - | |
Enph6g1100 | 1125 | Gene3D | - | 386 | 641 | IPR038718 | - | |
Enph6g1100 | 1125 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 730 | 897 | IPR001650 | - | |
Enph6g1100 | 1125 | MobiDBLite | consensus disorder prediction | 334 | 365 | - | - | |
Enph6g1100 | 1125 | PANTHER | SNF2/RAD54 HELICASE FAMILY | 210 | 1025 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Enph6g1100 | Enph-Chr6 | 13657574 | 13667108 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Enph6g1100 | 399 | 867 | RAD5 or RAD16-like Gene Family | AT1G02670 | 27.176 | 5.81e-34 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SNF2 | Enph6g1100 | SNF2_N | 8.8e-69 | CL0023 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Enph6g1100 | - | - | pcin:129308606 | 2047.71 |