LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph6g1092	ATGGATGCTCTTTCACCTGCACAGCTTCTTCCCGTTTCCTTTGAGAAGCCAACTCCCAGTTTTTTTCTTTCTCATTCACAAAATCATACCTTCAAGTTTTTCTTTTCCGGGTATCCAATCATCCCTGGTCTCTACCTTATCTCCAAGTTCCGAACTCCACCGTCCATTTTAAATTCCTCTTCCTTGACCCGCGAAGCGGTTGATAAAGTTAGCTCTCCCACGTTAAGGGAAATCTGCGAGACCCATGTTCCCCAGCATATATTAGACAGGGTGGAAGAGATTGGATATGTCATGCCTACCGATGTCCAGAGGCAAGCATTGCCTTCTCTTTTATCTGGCCGTGATTGCATACTTCATGCTCAGACAGGTTCTGGGAAAACACTTGCATACCTGCTTCTGATATATTCCATCATAAACACTGCAAAATCTGCTGTGAGCTCTTGTTGTGGTGCCCACCCGAGAACTTGGCATGCAATTGCTAGGATCTTGGCTGCAAGGTTAACAGAGGTTGAGGAGCAGAAGTCGTGTACCATTATGGCTCTTTTAGATGGAGGAACATTGAGAAGACACAAAAGTTGGCTAAAGGCAGAACCTCCAATGATAGTGGTAGCAACAGTGGGGAGCTTATGCCGCATAATTGAAAGACAATTTTTTAAGCTTGAAACCGTGCGGGTGCTGGTAGTTGATGAGGTTGACTTTATTTTCAATTCTTCGAAGCAAGTCAGTTCTCTTAGAAAGCTTTTAGCTCTATATTCGTCATGCAATAACCGTCAAACAGTTTTCGTCAGTGCATCTATACCTCAGCATAGGCAATTTCTTCATAATTGTGTGCAGCAGAAATGGACTAAGAGTGATGTAGTCCATATTCATGTCAACCCAGTTGAGCCCATGCCATCACGCCTGCAACATAAATTTGTAGTATGTCATAGGAAAAAGAAACAACAAACCCTGTTATCTTTGGTACAATCTGATGCACCTGAGTCTGGCATTATATTTGTTAGTGAGCAGTCTGAGAAGTCAAAACAGGCTGGAAATGCTCCCCCGACATCCCTTCTGATTGACTTTCTGAAAACTTCATATCAAGGTTCTTTAGATATCCTCCTCCTTGAGGAAGAAATGAATTTCAATTCACGAGCAATTTCACTGTTGGAGCGATTTGTTCTCCAGAAATATGAAAATGAGTTGATGTTTAATTCTGAAGAGCTTACTTCATAA	1215	0.4222	MDALSPAQLLPVSFEKPTPSFFLSHSQNHTFKFFFSGYPIIPGLYLISKFRTPPSILNSSSLTREAVDKVSSPTLREICETHVPQHILDRVEEIGYVMPTDVQRQALPSLLSGRDCILHAQTGSGKTLAYLLLIYSIINTAKSAVSSCCGAHPRTWHAIARILAARLTEVEEQKSCTIMALLDGGTLRRHKSWLKAEPPMIVVATVGSLCRIIERQFFKLETVRVLVVDEVDFIFNSSKQVSSLRKLLALYSSCNNRQTVFVSASIPQHRQFLHNCVQQKWTKSDVVHIHVNPVEPMPSRLQHKFVVCHRKKKQQTLLSLVQSDAPESGIIFVSEQSEKSKQAGNAPPTSLLIDFLKTSYQGSLDILLLEEEMNFNSRAISLLERFVLQKYENELMFNSEELTS	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph6g1092	404	CDD	DEADc	87	277	-	-
	Enph6g1092	404	PANTHER	DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL	76	339	-	-
	Enph6g1092	404	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	107	284	IPR014001	-
	Enph6g1092	404	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	73	270	IPR027417	-
	Enph6g1092	404	Pfam	DEAD/DEAH box helicase	100	268	IPR011545	GO:0003676\|GO:0005524
	Enph6g1092	404	SMART	ultradead3	95	304	IPR014001	-
	Enph6g1092	404	Gene3D	-	64	282	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph6g1092	Enph-Chr6	13585505	13593010	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph6g1092	87	268	Eukaryotic Initiation Factors Gene Family	AT5G11200	24.590	8.20e-11	61.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph6g1092	-		-	qsa:O6P43_003412	493.426