Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g0995 ATGAATGGTGGAAGTAACAACAACATGCAAAAGTTCAAAGGCGTGGTGCCTCAGCAAAATGGTCATTGGGGTGCTCAGATATATGCAAATCACCAAAGAATATGGCTTGGAACCTTCAAATCCGAACGAGAAGCTGCCATGGCTTACGATAGCGCCACCATCAAGCTTCGAAGCGGCGAAAGCCACCGGAACTTCCCTTGGAACGATCAAACAGTTCAAGAGCCTCTTTTCCAGAGCCATTACACCACGGAAGCAGTCCTAAGCATGATCAGAGATGGCACCTACCCTTCCAAGTTCGCTTCTTTTCTCATAAGCACTCGAACCCTAACTCTAAAGCTAAATGGAAACGAACAAATTACAAGGGTCAGAAATAACAGTGAGGAAAAATTCTCCTGCACCCAACTCTTCCAGAAGGAACTTACACCAAGTGATGTGGGCAAACTCAACAGGCTGGTCATCCCCAAGAAACATGCGAGTAGGTATTTCCCTTGCGTTTCTGGTACGATAGAAGAAGCTGACGATAATGATAATAATTATGGGACGATGGATATCAATAGTGACACTGAGCTTGTGTTTTACGACAAGCTGATGAGGTCGTGGAAGTTTAGGTACTGCTATTGGAGGAGCAGTCAGAGCTTCGTGTTCACAAGGGGGTGGAACAGGTTTGTGAAAGACAAGAGATTGAGGGCTAAGGATGTTATTGTATTTTATAAGTGTGAGCCTATAATTGATAGAGGGATTAATGAGGGTGAAGTGTTTTCTTTGATTGATGTGATCTACAATGAAGATAGTATTAATGAGAGGAAGCAGTGGTTTGAAGAGAGGAAGAGAGATCACAGACAGAGTTTTGGGAAAACGTTGAGTTTGAATGATGGGACAGAAGTAGAAGATGAGGAGACAAAGGATAGAAAGCAAATATTGCATTCTCCAACTCATGATGCACAAAAGGCTTTGAAGCTTTTTGGTGTAAGAATTAACTGA 981 0.4281 MNGGSNNNMQKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEREAAMAYDSATIKLRSGESHRNFPWNDQTVQEPLFQSHYTTEAVLSMIRDGTYPSKFASFLISTRTLTLKLNGNEQITRVRNNSEEKFSCTQLFQKELTPSDVGKLNRLVIPKKHASRYFPCVSGTIEEADDNDNNYGTMDINSDTELVFYDKLMRSWKFRYCYWRSSQSFVFTRGWNRFVKDKRLRAKDVIVFYKCEPIIDRGINEGEVFSLIDVIYNEDSINERKQWFEERKRDHRQSFGKTLSLNDGTEVEDEETKDRKQILHSPTHDAQKALKLFGVRIN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g0995 326 CDD B3_DNA 135 237 IPR003340 GO:0003677
Enph6g0995 326 ProSiteProfiles AP2/ERF domain profile. 11 66 IPR001471 GO:0003700|GO:0006355
Enph6g0995 326 Pfam B3 DNA binding domain 136 237 IPR003340 GO:0003677
Enph6g0995 326 Gene3D - 131 249 IPR015300 -
Enph6g0995 326 CDD AP2 10 68 IPR001471 GO:0003700|GO:0006355
Enph6g0995 326 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 8 325 IPR044800 GO:0003700
Enph6g0995 326 SUPERFAMILY DNA-binding pseudobarrel domain 134 239 IPR015300 -
Enph6g0995 326 Pfam AP2 domain 11 57 IPR001471 GO:0003700|GO:0006355
Enph6g0995 326 Gene3D AP2/ERF domain 10 67 IPR036955 GO:0003700|GO:0006355
Enph6g0995 326 FunFam AP2 domain-containing protein RAP2.8 10 67 - -
Enph6g0995 326 ProSiteProfiles B3 DNA-binding domain profile. 136 262 IPR003340 GO:0003677
Enph6g0995 326 SMART rav1_2 11 72 IPR001471 GO:0003700|GO:0006355
Enph6g0995 326 SUPERFAMILY DNA-binding domain 11 68 IPR016177 GO:0003677
Enph6g0995 326 SMART B3_2 136 251 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g0995 Enph-Chr6 12847689 12848669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g0995 7 258 RAV Transcription Factor Family AT1G51120 59.770 8.08e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Enph6g0995 B3 1.2e-24 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g0995 K09287 - cave:132163702 376.326