LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph6g0952	ATGGCATTGTGCCTTTATTCTTCGCTCAGTAATGACGGGCTGGTTCCTTCCCTAAATTCCAACTTTCTTTCTGGTAAAATTCCTATGTCCTTCCACATTAGCATAAACCAAAGAAATAGTAACCGCCTTGTCAATGTTTCTGTTTCTGTTTCAGTTTCTTGTTCCTCTCTCAAACTTGTACGAGACAGGTCACTTGATAGGCATGTCGTTAGTAAGAATAAAATTCGGTTTGTTCAAAAGATGATTACTTTACTTCTTTCTAAGCCAAAACACTATCTTCCACTACATATTCTCACAAAATGTCGATCTTATCTAAATCTCTATTCACCTCATTCACTGCTTGCTATGATCCATCGCTATCCATCCATCTTTGAACTCTTCACTATCCCATATCCACCCATACCACTCAATGCTACAAAGCCATATCCTCAACTCTGTGTTCGTCTAACTCCGGCTGCAGCAGCCCTTGCTACTGAGGATTTGAGCCTCAAAAATACCATTTCCACCACCTTGGCAACCAAACTCCAGAAGCTTCTTATGCTATCTTCTCACCGTCGGCTCCTTTTGTCAAAGTTGGTTCACCTTGCTCCAGATCTTGGCCTTCCTCCAAATTTTCGTCCCAGGCTCTGCAATGACCACCCGGATAGATTCAAAACTGTTGACACTTCTTATGGTCGTGCTCTCGAGCTTGTATCCTGGGATTCCAGCTTGGCACAGCCTTTGCCCTCTCCTACATTTCATTCTCGTGATTTAATAGTTGACAGACCTTTGAAGTTTAAGCAACTGAGGCTTCGGAAGGGGCTTAATTTAAAGAGACGCCACCAGGATTTCTTGATAAGATTTGAAGAAATGCCTGAAATATGTCCTTATGGGACCCCTATCGAATGTCTGGAGAAGGAGTCAGTTGAGGCAGAGAAGAGATCTTGTGCTGTGGTAAGAGAGGTACTTGGGATGATGGTTGAAAAGAGGACTTTGATAGACCACTTGACTCATTTCAGAAAGGAGTTTGGGCTTCCAAACAAGTTGAGAGGGATGATCCTGAGGCATCCAGAGTTATTTTATGTTAGTTTAAAAGGGCAAAGGGATTCTGTATTCCTGGTTGAGAAGTTTGATGAGAAGGGTGACCTATTAGAGAAGGATAAGCTTTTGCATGAGAGGCTAGCTGAAGTTCTGAAGCCTTTTCTAGATATTACACCTATGGCTAAGTCTTTCCTGCAAGTGGCGGCAACCGAGGAGGCTGCACCCCCTCTTCGAGTTGTGCAGATGGAAGGACTGGTTATCTTAAAAATAATTAAACATTGCAAGGACCATTCTCCTACTTTAGTCACTGGACAACTTCTTGGACTTGATGTTGGCAGTGTTCTTGAAGTTACTAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAGATTGAGGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAGTCTACATTGCTAGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGTTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTCTCTGACTCATTTATGGAACTCTATCGCAGCAATAATATTACAGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTTGAGGAGATACCGATCAAAGTTTCAAATTCTGCCCTTATCAGTGCCTTTATGACTGAGCTGGAACCTGATACACCAGTTACCCAGTGTGATTATGATCGTCTCCAATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGATGATTTGTCATTAGAACAGCAGAAGTTCCAATTCTACTACCGGAGTTTGTCCCGCCAGCAGGCCCAGCAGCAAGCATGGCTTCAGAAAAGAAGGTTTGCACTTTTGTCGGCTAACCTTCTGATATTCAATGTAATAAGGTTGCATATTAGAATAGAAGCTTATGCTATCTGGTTTCAGTTGTTGAACTTGGAGTATTTTGGTGCAACTAATGTAGTGCAATCGAAGGTCAAAGAGAGGGCAGAGAACATGGCACGTAAAGCTGCTGGAGAGGACCCATTGCCTGAGGAAGATCCATCAAACCCCATTTTCAAGCCCCTCCCTGAGCCATCACGACTGGACAGCTTCCTCATAACAAATCAAATTGCCAACTACTGCAACCAAATTAATGGGGTATCAGGGCAGAGCTTTAACAGGCTCTATTTAATGAAGGCTTTGCATGAAGATTGA	2343	0.4247	MALCLYSSLSNDGLVPSLNSNFLSGKIPMSFHISINQRNSNRLVNVSVSVSVSCSSLKLVRDRSLDRHVVSKNKIRFVQKMITLLLSKPKHYLPLHILTKCRSYLNLYSPHSLLAMIHRYPSIFELFTIPYPPIPLNATKPYPQLCVRLTPAAAALATEDLSLKNTISTTLATKLQKLLMLSSHRRLLLSKLVHLAPDLGLPPNFRPRLCNDHPDRFKTVDTSYGRALELVSWDSSLAQPLPSPTFHSRDLIVDRPLKFKQLRLRKGLNLKRRHQDFLIRFEEMPEICPYGTPIECLEKESVEAEKRSCAVVREVLGMMVEKRTLIDHLTHFRKEFGLPNKLRGMILRHPELFYVSLKGQRDSVFLVEKFDEKGDLLEKDKLLHERLAEVLKPFLDITPMAKSFLQVAATEEAAPPLRVVQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQQAWLQKRRFALLSANLLIFNVIRLHIRIEAYAIWFQLLNLEYFGATNVVQSKVKERAENMARKAAGEDPLPEEDPSNPIFKPLPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALHED	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph6g0952	780	CDD	MPN_eIF3h	418	729	IPR027524	GO:0003743\|GO:0005737\|GO:0005852
	Enph6g0952	780	Pfam	C-terminal region of eIF3h	707	779	IPR045810	-
	Enph6g0952	780	Pfam	C-terminal region of eIF3h	539	663	IPR045810	-
	Enph6g0952	780	MobiDBLite	consensus disorder prediction	715	736	-	-
	Enph6g0952	780	ProSiteProfiles	MPN domain profile.	420	553	IPR037518	-
	Enph6g0952	780	PANTHER	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	50	384	IPR045040	GO:0003723
	Enph6g0952	780	Gene3D	Cytidine Deaminase, domain 2	396	608	-	-
	Enph6g0952	780	Pfam	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	418	521	IPR000555	GO:0005515\|GO:0008233\|GO:0008237
	Enph6g0952	780	SMART	pad1_6	419	552	IPR000555	GO:0005515\|GO:0008233\|GO:0008237
	Enph6g0952	780	Hamap	Eukaryotic translation initiation factor 3 subunit H [EIF3H].	415	780	IPR027524	GO:0003743\|GO:0005737\|GO:0005852
	Enph6g0952	780	Pfam	Plant organelle RNA recognition domain	60	385	IPR021099	GO:0003723
	Enph6g0952	780	FunFam	Eukaryotic translation initiation factor 3 subunit H	399	608	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph6g0952	Enph-Chr6	12381777	12390980	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph6g0952	483	780	Eukaryotic Initiation Factors Gene Family	AT1G10840	69.799	1.05e-141	415

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph6g0952	K03247		-	gmx:100795273	609.372