Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g0763 ATGTCGAAGTCAGTGACTCCGGATGCGATTTCGATCTTGCTTGCGAACCCATCGCCTGATTCTTCATGGGAGCTTCCTGAGATCGTTGTCCAAGTCCTGGATCTCAAGCAAAGTGGCAACAGATATATGTTTACTGCAAGCGATGGGAAATTGAAGTTGAGAGCTATCCTACCCTCAAGTCAGAATTCTCAGGTACTCTCAGGAAATATTCAGAACCTTGGTCTCATTCGCATCACTGACTATACTCTCAACGACATCCCAAATAAATCAGAGAAGTACCTCATTGTCACAAAATGTGAACCGGTCTTACCTGCACTTGCAATGGAAATAAAGCATGAGATAAAGTTTGAGGAAACCGGTATTATTTTGAATCTAAAGCAAGATGACGAAATCAAAAGTCAGGATAAGACTGAAGGAGCTGGCTTTCTTATGAAACCAAAGCAAGTAGCCAAATCTGCTGCCCAGATCGTGCATGAACAACACGGAAATTTGGTTCCTGCCGCTCGAATGGCCATGACTCGCAGGGTGCGTCCCCTGGTTTCCTTAAATCCTTATCTGGGTAACTGGACAATAAAAGTTCAGGTTACAAACAAAGGGATCATGCGCACCTATAAGAATGCAAGAGGGGAAGGTTGTGTCTTCAACGTGGAACTGACAGATGAAGATGGCACTCAAATTCAAGCAACAATGTTCAATGAAGCTGCAAGGAAATTCTATGAAAAATTTGTGTTGGGGAAGGTTTACTACATTTCAAAGGGCACTCTAAAAGTTGCTAACAAGCAGTTCAAAACTGTTCAAAATGACTATGAAATGACACTGAATGAGATCTCTGAGGTGGAGGAAGCAACCAATGAAGAAAGCTTTGTTCCAGAAACAAGCTTCAAGTTTGTCCATATCGATCAGCTGGGTCCGTATGTTAACAGAAATGAACTTGTCGATGTCATTGGAATTGTTCAAAATGTGTCTCCTACAATGAGTATCCGCAGGAGGAGCAACAATGAAAGTGTCCCGAAGCGTGATATTACTATTGTTGATGAGACAAAGAAAACAGTTATCGTGTCTCTGTGGAATGAGAATGCGACTAATATAGGACAAGAATTGCTAGAGCTTGCTGATGATTCTCCTATAATAGCAATCAAAGCGCTCAAGGTTGGGGATTTTCAAGGTCTTTCCTTGTCCACTATAAGTAGAAGTCTAGTGCTGGTAAATCCAGACATACCTGAAGCTAAGAAGCTTAAATGCTGGTACGAATCTGAAGGTAGAGATGCTTCATTGTCACCTGTAAGCTCTGGCTCTAGTCCAGCATCCATGAATGGAATGAGATCAGTGTATTCTGACCGTGTTTCACTTTCTCACATCACCTCAAACCCATCATTGGGGGAGGACAAGCCTGCATTTTTCAGTATTAGGGCATACATTAGCTTTATCAAGCCTGACCAGACAATGTGGTACCGAGCTTGTAAAGCTTGCAACAAGAAAGTCACTGAAGCCCCTGGCGCTGGGTATTGGTGTGAAGGCTGCCAGAAAAATTATGCAGAATGCAATTTAAGATACATTATGGTCGTAAGAATTGCCGATGAAAGTGGAGAAGCCTATGTCTCTTTCTTCAATGAAGAAGCTGAGAAGATTGTTGGATGTTCTGCTGATGAACTTGATACCCTGAAGTCACAGGAGGGGGAAGACAATCCATATCAGTTGAAACTGAAACAAGCAACTTGGACTCCTTATCTTTTCCGGGTTAGTGTTTCTCAGAATGAGTATATGAATGAGAAGAGGCAGAGGATAACGGTCCGGGCAATTGTTCCAATTGACTTTGCTGCAGAGTCAAGGTATCTCCTGGAGGAGATATTAAAGATGAGAGTTTCTCAATAA 1872 0.4231 MSKSVTPDAISILLANPSPDSSWELPEIVVQVLDLKQSGNRYMFTASDGKLKLRAILPSSQNSQVLSGNIQNLGLIRITDYTLNDIPNKSEKYLIVTKCEPVLPALAMEIKHEIKFEETGIILNLKQDDEIKSQDKTEGAGFLMKPKQVAKSAAQIVHEQHGNLVPAARMAMTRRVRPLVSLNPYLGNWTIKVQVTNKGIMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLNEISEVEEATNEESFVPETSFKFVHIDQLGPYVNRNELVDVIGIVQNVSPTMSIRRRSNNESVPKRDITIVDETKKTVIVSLWNENATNIGQELLELADDSPIIAIKALKVGDFQGLSLSTISRSLVLVNPDIPEAKKLKCWYESEGRDASLSPVSSGSSPASMNGMRSVYSDRVSLSHITSNPSLGEDKPAFFSIRAYISFIKPDQTMWYRACKACNKKVTEAPGAGYWCEGCQKNYAECNLRYIMVVRIADESGEAYVSFFNEEAEKIVGCSADELDTLKSQEGEDNPYQLKLKQATWTPYLFRVSVSQNEYMNEKRQRITVRAIVPIDFAAESRYLLEEILKMRVSQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g0763 623 Gene3D - 175 284 IPR012340 -
Enph6g0763 623 Pfam Replication factor-A C terminal domain 466 612 IPR013955 -
Enph6g0763 623 CDD RPA1_DBD_C 450 616 IPR047192 -
Enph6g0763 623 NCBIfam replication factor-a protein 1 (rpa1) 4 616 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Enph6g0763 623 Gene3D - 430 619 IPR012340 -
Enph6g0763 623 Gene3D - 289 429 IPR012340 -
Enph6g0763 623 Pfam Replication factor-A protein 1, N-terminal domain 5 102 IPR007199 GO:0003677|GO:0005634|GO:0006260
Enph6g0763 623 FunFam Replication protein A subunit 175 284 - -
Enph6g0763 623 SUPERFAMILY Nucleic acid-binding proteins 445 619 IPR012340 -
Enph6g0763 623 Pfam Replication protein A OB domain 306 402 IPR031657 -
Enph6g0763 623 PANTHER REPLICATION FACTOR A 1, RFA1 189 582 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Enph6g0763 623 CDD RPA1_DBD_A 178 281 - -
Enph6g0763 623 SUPERFAMILY Nucleic acid-binding proteins 1 105 IPR012340 -
Enph6g0763 623 CDD RPA1_DBD_B 311 417 - -
Enph6g0763 623 FunFam Replication protein A subunit 432 619 - -
Enph6g0763 623 FunFam Replication protein A subunit 288 427 - -
Enph6g0763 623 SUPERFAMILY Nucleic acid-binding proteins 294 422 IPR012340 -
Enph6g0763 623 Gene3D - 4 111 IPR012340 -
Enph6g0763 623 Pfam OB-fold nucleic acid binding domain 189 277 IPR004365 GO:0003676
Enph6g0763 623 FunFam Replication protein A subunit 4 114 - -
Enph6g0763 623 SUPERFAMILY Nucleic acid-binding proteins 177 285 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g0763 Enph-Chr6 10608516 10612234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g0763 1 623 Core DNA Replication Machinery Family AT5G08020 67.093 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g0763 K07466 - qsa:O6P43_002222 999.579