Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g0534 ATGTCTATCATGACTATACCTTCGTTGAAGACCCTACCAATGGCAGAGTCTCGCCTTCTCTCGCTGCCTTCCTTAATCTCCAACAAAACCAAATACCCTTTTATCTCCATTCCATCTAAACCATTTCAACTTCAGGTCTCGTGCTCCAATTCCTCCCTCTTTTTACCATCTCTACTTCTAACTAAGAAAACCCCCAATTTGTCTATACTCACACACGTAGCTCAGACTTCGGATTGGGCTCAACAGGAAGAAGACAACACCGTCACCATAGACGAAGATGAAAATGAAGATTTGGGTGATCCAGAAGCTCGTCATTCGGATTGGGATGCTGAGAGTGAAGATGCAGCCATTGAGGGTAGCAAGGGTAAAGGAGAGAGTAATGAAGATGATGATTTTTTGAAGGATGGGGATTTTGCAGAACCACCCGAAGAAGCAAAACTTTTTGTCGGAAATTTGCCTTATGATGTCGATAGTCAGAGTTTGGCCATGCTTTTTGAACAGTCTGGAACGGTGGAAGTTGCTGAGGTTATCTATAATAGGAGCACTGACCAAAGTCGTGGGTTCGGATTTGTAACGATGAGTACAGTTGAAGAAGCTGACAAAGCTGTCGAAAAGTTCAATCGCTACGATCTAGATGGAAGACTGCTGACTGTTAACAAGGCTGCTCCAAGAGGAACACAGCCTGAACGCCCGCCCCGTGTCTTTGAACCATCCCTCAGGGTCTATGTTGGCAACTTGCCATGGGATGTTGATAATGGTCGCCTGGAGCAAATTTTCAGTGAGCATGGTAAGGTTGTGAATGCTCGGATTGTCTATGACCGAGAGACTGGTCGGTCTCGTGGGTTTGGCTTTGTCACAATGTCCAGCGAGACAGAAATGAATGATGCCATTGCTGCTCTCGATGGTCAGAGTTTGGACGGGAGGGCGATCAGAGTGAATGTTGCTGAGGAAAGACCAAGGCGAGGTGGCTCCTTTTGA 978 0.4632 MSIMTIPSLKTLPMAESRLLSLPSLISNKTKYPFISIPSKPFQLQVSCSNSSLFLPSLLLTKKTPNLSILTHVAQTSDWAQQEEDNTVTIDEDENEDLGDPEARHSDWDAESEDAAIEGSKGKGESNEDDDFLKDGDFAEPPEEAKLFVGNLPYDVDSQSLAMLFEQSGTVEVAEVIYNRSTDQSRGFGFVTMSTVEEADKAVEKFNRYDLDGRLLTVNKAAPRGTQPERPPRVFEPSLRVYVGNLPWDVDNGRLEQIFSEHGKVVNARIVYDRETGRSRGFGFVTMSSETEMNDAIAALDGQSLDGRAIRVNVAEERPRRGGSF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g0534 325 FunFam 31 kDa ribonucleoprotein, chloroplastic 74 228 - -
Enph6g0534 325 FunFam 31 kDa ribonucleoprotein, chloroplastic 229 323 - -
Enph6g0534 325 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 239 317 IPR000504 GO:0003723
Enph6g0534 325 SUPERFAMILY RNA-binding domain, RBD 230 322 IPR035979 GO:0003676
Enph6g0534 325 Gene3D - 73 228 IPR012677 -
Enph6g0534 325 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 145 223 IPR000504 GO:0003723
Enph6g0534 325 PANTHER OS02G0815200 PROTEIN 64 319 - -
Enph6g0534 325 CDD RRM2_NsCP33_like 240 315 - -
Enph6g0534 325 Gene3D - 229 325 IPR012677 -
Enph6g0534 325 SUPERFAMILY RNA-binding domain, RBD 141 233 IPR035979 GO:0003676
Enph6g0534 325 MobiDBLite consensus disorder prediction 99 130 - -
Enph6g0534 325 MobiDBLite consensus disorder prediction 78 138 - -
Enph6g0534 325 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 241 311 IPR000504 GO:0003723
Enph6g0534 325 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 147 216 IPR000504 GO:0003723
Enph6g0534 325 SMART rrm1_1 240 313 IPR000504 GO:0003723
Enph6g0534 325 SMART rrm1_1 146 219 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g0534 Enph-Chr6 8731243 8734374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g0534 106 321 Eukaryotic Initiation Factors Gene Family AT3G16380 33.333 1.75e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g0534 - - qsa:O6P43_030799 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph6g0534 6 8731243 8734374 Enph5g0442 5 3492149 3494535 CCT
Enph6g0534 6 8731243 8734374 Enph5g0442 5 3492149 3494535 ECH
Enph6g0534 6 8731243 8734374 Enph6g0534 6 8731243 8734374 ECH