Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph6g0281 ATGGACTTCGACGAGTACGATTACTTGGAAAAGACAGTGGAGGAGCGGGGGGATCAAGTTTCAATGAAGAAGAGCAAGGAGAAAAACGACAAGAGTGAAAGGACTTACAGGAAGCGTGATGCCGACGAGGATGTTGATACTGAAGACAAGAAAAGCAAGAGGTCCAGGGGCGACGATGAGAATGGGTCGAAAAGAGATCGTGAGGACCGCGAGAGAGAACGGTCGAGTCGAGAAAAGGAGCGGCATAGGAGCAGTAGAGACAGAGAGAGGGATGGGGATAGGGAGCGAGAGAGGAGTAGGAAAGGGACAGGGAGAAAGAGAGAGACAAGGAGAGGGAAAGAGAACGAAGGGACAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGGGAGAGAAGAGAGAGGGATAAGGAGAGAGAAAAGGAACGGGAGAGGAGGGAGAGGGAGAAGGAGAGAGAGAAGGAGGAGAGGGAGAGGTCCAGGAGAAGCATAAGTCGTCCTGATCGAGATAGAGAAAGAGAACGAGAATTGGAGGCCAGAGATGGCCGGAGATTTAGGGATAAGAAAGAGGCTGTGGAACCTGACGCAGATCCAGAAAGGGATCAGAGAACTGTTTTTGCATATCAGATGCCTCTAAAAGCAACGGAGAGAGATGTTTATGAATTCTTCTCAAAAGCTGGCAAGGTGAGGGATGTCCGTCTGATCATGGATAGGAATTCAAGGCGGTCTAAAGGTGTTGGGTATATTGAATTTTATGATGTAATGTCAGTGCCAATGGCAATTGCCCTGTCCGGCCAACTGCTTCTGGGGCAGCCTGTAATGGTCAAACCTTCTGAGGCTGAAAAGAATCTTGTTCAGTCTAATACTGCCAGTGGAGGTGCAGGTGTTGCTGGACCGTATGGAGCAGTGGACAGGAAACTGTATGTGGGAAACCTTCACTTCAACATGACTGAGAGTCAGCTGAGAGAGATTTTTGAGCCATTTGGTGCAGTGGAGCTTGTTCAGCTGCCCCTTGACCTTGAGACAGGACATTGCAAGGGTTTTGGGTTTGTTCAATTTGCCAATCTTGAAAATGCCAAGGCAGCTCAGAGTTTGAACGGAAAACTGGAGATTGCTGGTAGGACTATTAAGGTTTCATCTGTTACAGATCATGTTGGAGGCCAAGATACAAGTGCAAAATCGGCAGATTTGGATGATGATGAAGGTGGATTGTCATTGAATGCTCAATCAAGAGCATTGCTCATGCAAAAGTTGGATCGCTCTGGTATTGCTACAAGCATTGCTGGGTCTATTGGTGGTGTGCCTGTTGTGAATGGCTCAGCCCCTTCTCAGCAGGCTGTTAGTTTGCCAGTTGGGGGTCCAGGTATAGTACATGCTTCAGCTCTCCCAACAGCCATTGTGCCTACCCCTGGAGGAGAGCCAGTTGGAACCCCCAGTGAGTGTTTGCTGTTGAAGAATATGTTTGATCCAGCTACTGAGACGGAACCAGATTTTGATGAGGATATTAAAGAGGATGTAGCAGAAGAATGTTCTAAATTTGGTCGGGTGAAACACATTTATGTTGACAAAAGAAGTGCTGGTTTTGTGTATTTACGTTTTGAGACAGTGGAAGCAGCTTCTGCTGCTCAACAGGCAATGCACATGAGATGGTTTGCCCGCAGGTTGATTTCAGCGATATTCATGCAAACCCAGGTATACGAAGCTAAGTTTAAAGGAGGAGCCTGA 1725 0.4771 MDFDEYDYLEKTVEERGDQVSMKKSKEKNDKSERTYRKRDADEDVDTEDKKSKRSRGDDENGSKRDREDRERERSSREKERHRSSRDRERDGDRERERSRKGTGRKRETRRGKENEGTRRRRRRRRRRGRERRERDKEREKERERREREKEREKEERERSRRSISRPDRDRERERELEARDGRRFRDKKEAVEPDADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTASGGAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGAVELVQLPLDLETGHCKGFGFVQFANLENAKAAQSLNGKLEIAGRTIKVSSVTDHVGGQDTSAKSADLDDDEGGLSLNAQSRALLMQKLDRSGIATSIAGSIGGVPVVNGSAPSQQAVSLPVGGPGIVHASALPTAIVPTPGGEPVGTPSECLLLKNMFDPATETEPDFDEDIKEDVAEECSKFGRVKHIYVDKRSAGFVYLRFETVEAASAAQQAMHMRWFARRLISAIFMQTQVYEAKFKGGA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph6g0281 574 Gene3D - 475 572 IPR012677 -
Enph6g0281 574 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 480 563 IPR000504 GO:0003723
Enph6g0281 574 CDD RRM2_RBM23_RBM39 307 384 - -
Enph6g0281 574 Pfam linker between RRM2 and RRM3 domains in RBM39 protein 398 498 IPR029123 -
Enph6g0281 574 Coils Coil 130 163 - -
Enph6g0281 574 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 280 IPR000504 GO:0003723
Enph6g0281 574 SMART rrm1_1 204 276 IPR000504 GO:0003723
Enph6g0281 574 SMART rrm1_1 481 558 IPR000504 GO:0003723
Enph6g0281 574 SMART rrm1_1 306 379 IPR000504 GO:0003723
Enph6g0281 574 MobiDBLite consensus disorder prediction 133 178 - -
Enph6g0281 574 FunFam Splicing factor, CC1-like protein 475 574 - -
Enph6g0281 574 SUPERFAMILY RNA-binding domain, RBD 305 560 IPR035979 GO:0003676
Enph6g0281 574 CDD RRM3_RBM39_like 479 561 - -
Enph6g0281 574 Gene3D - 196 289 IPR012677 -
Enph6g0281 574 FunFam Splicing factor CC1-like 289 394 - -
Enph6g0281 574 CDD RRM1_RBM39_like 204 276 - -
Enph6g0281 574 Gene3D - 301 397 IPR012677 -
Enph6g0281 574 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 305 383 IPR000504 GO:0003723
Enph6g0281 574 MobiDBLite consensus disorder prediction 9 115 - -
Enph6g0281 574 MobiDBLite consensus disorder prediction 116 132 - -
Enph6g0281 574 MobiDBLite consensus disorder prediction 1 178 - -
Enph6g0281 574 FunFam Splicing factor CC1-like 126 288 - -
Enph6g0281 574 PANTHER SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED 1 570 IPR006509 GO:0003723|GO:0005634|GO:0006397
Enph6g0281 574 SUPERFAMILY RNA-binding domain, RBD 195 298 IPR035979 GO:0003676
Enph6g0281 574 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 504 556 IPR000504 GO:0003723
Enph6g0281 574 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 272 IPR000504 GO:0003723
Enph6g0281 574 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 307 377 IPR000504 GO:0003723
Enph6g0281 574 NCBIfam splicing factor, CC1-like family 92 570 IPR006509 GO:0003723|GO:0005634|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph6g0281 Enph-Chr6 6190626 6197647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph6g0281 285 378 Eukaryotic Initiation Factors Gene Family AT4G34110 38.947 1.85e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph6g0281 K13091 - qsa:O6P43_030384 660.603