LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph6g0259	ATGGACTTGACCGCCAAACTTCATCACCTTGAGCTCGTTTCAAGCTTCCTCACCGGCACCGTCATTGTGGATACACGGAAAGCAGCTATACGACCGTCCGTTTGGCCAGCTTCAAATCGTGTGGTTTCTCAAACCCTTAGAGGTAATACTAATTTAGTTAAATCCACTCAGTTTATTGGTCCTAGAAGAGCGAATTTTAGTATCGCTGCTAGTTCATCTGCGCTTGCCATCGAGACATCGGCGGCAGAAACCACGACCAAAGAGGACATTGAGTCTCTGTTTTCGAACACTTTGGTTGATGAATTTGAGAATAAGCGTGTGAATAAGCAATCGAATACCGGGGCGTCCAGCATTTCATCTGGTGTCAAGTTAGAGAATGTGAGCAAAAGCTACAAGGGCGTCACTGTTTTGAAAGATGTAAGCTGGGAAGTGAAGAAGGGTGAAAAAGTGGGATTGGTTGGTGTGAATGGTGCTGGTAAGACAACACAGATGAAAATTATTGCTGGTCAGGAGGAGCCAGACTCGGGGAATGTAATAAAAGCCAAGCCAAATATGAAAATTGCTTTTCTGAGTCAAGAATTTGAGGTATCTCTCAGTAGGACGGTGAGGGAGGAATTTCTGAATGCATTTAAAGAGGAAATGGAGATAGCAGGGAAATTGGAAAAGGTGCAAAAGGCACTCGAGGGTGCTGTGAATGATTTAGATTTGATGGGAAGGCTTTTAGATGAGTTTGATTTGCTCCAGAAGAAGGCCCAGGCAGTAAACTTGGATGAGGTAGATGCAAAGGTAAGTAAATTGATGCCAGAACTTGGGTTTTCTTCAGAGGATTCAGACAGGCTGGTGGCGTCGTTTAGTGGTGGATGGCAGATGAGGATGTCTCTTGGAAAGATTTTACTTCAGTTTGTTATTTCAAAGGCAGCATGGATTGAATCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAAGGACTTGATAAACAGGTTAGGTGCTGGAGTGAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGCTGGAGAGACTTCAAGAAGAGGAATTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATCAGGTTCCCTGATCGTGGAAGAAGTGGAAGATCTGTCATAACAATTAAGAACTTGGAATTTGCCTTTGAGGATAAGGTGCTCTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTGAAAATTGTAATGGGTTTAGAGAAGCCAAACAGGGGTGAAGTTGTGCTTGGCGAGCATAACGTATTACCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGGAGAAGACAGTGCTTGAGACAATAGAAGAAGCTGCTGAGGACTGGAGGATTGATGATATTAAAGGCCTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACCGGAAAGTTTCTCTATTGAGTGGCGGTGAGAAGGCTCGTCTGGCTTTCTGCAAATTTATGGTAACACCATCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATTCCTTCTAAAGAAATGCTTGAGGAGGCAATAAACGAGTACACGGGCACTGTTATTACAGTCTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTGATAGAAGTTAACGATGGAGTTTTACAGGATTATGCAGGTGACTATAATTATTATTTAGAAAAGAATCTTGATGCTAGGGCCAGAGAGCTTGAACGTGAGGCAGAGCTTGACGAGAAAGCTCCAAAAGTGAAAGCCAAGTCCAAGATGTCAAAGTCTGAGAAAGAAGCAAGGAAGAAGCAGAAGATGCAGGCTTTTCAAGCAGCAAAGCAGAAGTCCAAAGGTTCCAAAAATTCCAAGAGATGGAATTGA	1950	0.4267	MDLTAKLHHLELVSSFLTGTVIVDTRKAAIRPSVWPASNRVVSQTLRGNTNLVKSTQFIGPRRANFSIAASSSALAIETSAAETTTKEDIESLFSNTLVDEFENKRVNKQSNTGASSISSGVKLENVSKSYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMKIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLNAFKEEMEIAGKLEKVQKALEGAVNDLDLMGRLLDEFDLLQKKAQAVNLDEVDAKVSKLMPELGFSSEDSDRLVASFSGGWQMRMSLGKILLQFVISKAAWIESQYAAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLERLQEEELVEKPFQRKQMKIRFPDRGRSGRSVITIKNLEFAFEDKVLFKKANLTIERGEKIAIIGPNGCGKSTLLKIVMGLEKPNRGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETIEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYTGTVITVSHDRYFIKQIVNRVIEVNDGVLQDYAGDYNYYLEKNLDARARELEREAELDEKAPKVKAKSKMSKSEKEARKKQKMQAFQAAKQKSKGSKNSKRWN	649

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph6g0259	649	Pfam	ABC transporter	300	371	IPR032781	-
	Enph6g0259	649	Pfam	ABC transporter	137	299	IPR003439	GO:0005524
	Enph6g0259	649	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	123	300	IPR027417	-
	Enph6g0259	649	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	362	589	IPR027417	-
	Enph6g0259	649	Pfam	ABC transporter	398	529	IPR003439	GO:0005524
	Enph6g0259	649	PANTHER	ABC TRANSPORTER ATP-BINDING SUBUNIT	300	640	-	-
	Enph6g0259	649	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	122	384	IPR003439	GO:0005524
	Enph6g0259	649	MobiDBLite	consensus disorder prediction	600	629	-	-
	Enph6g0259	649	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	382	597	IPR003439	GO:0005524
	Enph6g0259	649	FunFam	ABC transporter ATP-binding protein	342	611	-	-
	Enph6g0259	649	MobiDBLite	consensus disorder prediction	600	649	-	-
	Enph6g0259	649	SMART	AAA_5	146	402	IPR003593	GO:0016887
	Enph6g0259	649	SMART	AAA_5	406	569	IPR003593	GO:0016887
	Enph6g0259	649	Gene3D	-	118	307	IPR027417	-
	Enph6g0259	649	CDD	ABCF_EF-3	382	573	-	-
	Enph6g0259	649	ProSitePatterns	ABC transporters family signature.	501	515	IPR017871	GO:0005524\|GO:0016887
	Enph6g0259	649	Coils	Coil	587	607	-	-
	Enph6g0259	649	Gene3D	-	344	611	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph6g0259	Enph-Chr6	5949134	5954161	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph6g0259	372	599	Calmodulin-binding Proteins	AT2G36910	25.197	1.90e-13	72.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph6g0259	-		-	csv:101206768	815.453