LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph6g0189	ATGGCCGTTACACCTTTTGGAAGTACATCTGTTGCACAATGGGGAGTTCGTCCTCAATTTTTCTTGAGATCCTGTCTGACTGGCAAGATTGTATCATCTAGATACAAGATAACAAGCAGGGATAGCATTATGGCCTCCATGAGTTCAAGTTTTTTGTCTCAGGATTCCTTATGCCCCCTATTGGGCTTGGGTTCAACTCAAACATTACATTGTCGCACGGGATCAAGGTTGATAGTTAGAGCAAATGCAGATTACTATTCTGTACTTGGGGTGTCAAGAAATGCCAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAACTATCACCCTGATGTGAACAACTGCAGAGAAGCTGGAGCAGAACAGAAATTTAAGGAAATCAGCAACGCATACGAGGTCTTATCAGATGATGAGAAAAAATCCATATATGACATGTATGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGAGATTTCACTAATCCTTTTGATCTGTTTGAGACGCTATTTGAGGGCATGAATCGTGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGTTGATGGGAATGCTGGAAGACGAGGTGGTTCTCCAGGGGACCTCTTTGTTGTCATTGAAGTCATTCCAGATCCTGTCCTTAAACGTGATGACACAAACATCCTCTACAATTGTAAGGTGTCTTACGTTGATGCAATCTTGGGGACAACAATCAAGGTTCCTACTATAGACGGCATGGTGGATTTAAAAATTCCCGCTGGGACCCAACCCAACACCACTCTTGTTATGGCAAAGAAAGGTGTTCCCTTGTTGAATAAAAGCAATATGAGGGGTGATCAATTGGTTCGTGTGCAGGTCGAAATACCTAAAAGACTGACCAGTGAGGAGAGGAAGCTGATAGAAGAACTTGCTGATTTAAGGAAAGGCAAGACTGCGACCAGTAGTAGGAGATAA	966	0.4369	MAVTPFGSTSVAQWGVRPQFFLRSCLTGKIVSSRYKITSRDSIMASMSSSFLSQDSLCPLLGLGSTQTLHCRTGSRLIVRANADYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNNCREAGAEQKFKEISNAYEVLSDDEKKSIYDMYGEAGLKGSGMGMGDFTNPFDLFETLFEGMNRGMNNRGSWNGAVDGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYNCKVSYVDAILGTTIKVPTIDGMVDLKIPAGTQPNTTLVMAKKGVPLLNKSNMRGDQLVRVQVEIPKRLTSEERKLIEELADLRKGKTATSSRR	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph6g0189	321	FunFam	Chaperone protein dnaJ A6 chloroplastic	81	187	-	-
	Enph6g0189	321	CDD	DnaJ	84	139	IPR001623	-
	Enph6g0189	321	Pfam	DnaJ C terminal domain	181	293	IPR002939	-
	Enph6g0189	321	PRINTS	DnaJ domain signature	86	104	IPR001623	-
	Enph6g0189	321	PRINTS	DnaJ domain signature	122	142	IPR001623	-
	Enph6g0189	321	PRINTS	DnaJ domain signature	142	161	IPR001623	-
	Enph6g0189	321	PRINTS	DnaJ domain signature	104	119	IPR001623	-
	Enph6g0189	321	PANTHER	DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED	183	319	-	-
	Enph6g0189	321	ProSitePatterns	Nt-dnaJ domain signature.	127	146	IPR018253	-
	Enph6g0189	321	Gene3D	DnaJ domain	81	187	IPR036869	-
	Enph6g0189	321	Pfam	DnaJ domain	84	147	IPR001623	-
	Enph6g0189	321	SUPERFAMILY	Chaperone J-domain	81	181	IPR036869	-
	Enph6g0189	321	Gene3D	-	213	321	-	-
	Enph6g0189	321	SMART	dnaj_3	83	142	IPR001623	-
	Enph6g0189	321	CDD	DnaJ_C	194	296	-	-
	Enph6g0189	321	FunFam	Chaperone protein dnaJ 1, mitochondrial	213	320	-	-
	Enph6g0189	321	SUPERFAMILY	HSP40/DnaJ peptide-binding domain	218	304	IPR008971	GO:0006457\|GO:0051082
	Enph6g0189	321	ProSiteProfiles	dnaJ domain profile.	84	150	IPR001623	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph6g0189	Enph-Chr6	5241170	5248162	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph6g0189	85	149	C2H2 Transcription Factor Family	AT1G74250	43.478	3.90e-10	58.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph6g0189	K03686		-	gmx:100811006	283.878