Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g1438 ATGGACCTTGGTGGGGTTCGTAAGAGGGGAAGGCCTGAAGCTCCTCCCTTCAATGGCAATGGCGGCGTCAAGAAATCCAGGCCAGAAACGGAGTCCTTTCCAACTGGTTTAGGAAGCAAATCAAAGCCATGCACAAAGTTTTTCAGATTTGTGGTGCTGTACATGATTGCTGTGAAATCATGTACTGATAATGTGCTCATCACGTCCGGTTGTCCATTTGGTGAAGGATGCCATTTCTTGCACTATGTTCCTGGGGGCATAAAAGCTGTCTCGCAGATGATCAATATTGGTACTAATCCTGCACTTCCACAAGCCAGTAGAAATCCAACAGTTCCACCGTCCTTTCCTGATGGCTCCTCTCCTCCGGCTGTTAAAACCCGCTTGTGTAACAAGTATAATACAGCTGAAGGTTGCAAATTTGGTGATAAATGCCACTTTGCCCATGGCGAGTGGGAGCTTGGAAAACCAACGGCTCCATCTTATGAAGATCCTCGATCCTTGGGACAAATGCAAAGCAGGGTCAGTGGGCGGGTTGAGCCCCCACCTCTGGCTCATGGAGCTGCAGCCAGCTTTGGAGCCTCTGCTACTGCTAAGATTAGTATCAATGCTTCGCTTGCTGGAGCAATCATTGGTAAAAATGGTGTCAATTCTAAGCAAATTTGTCGTGTGACAGGGGCGAAACTCTCAATCCGGGATCATGACTCAGATCCAAATCTTAAGAACATTGAGCTGGAGGGCAGTTTTGATCAGATCAAACAAGCTAGTGCTATGGTTCGTGAACTTATTGTGAATGTTGGCTCTTTCTCTGGACCTCCTATGAAAATCACTGCACCACATGCATCAGCCCCAGCTAGCAACTTCAAGACTAAACTGTGTGAAAACTTTGCAAAAGGATCCTGCACTTTTGGGGAAAGGTGTCACTTCGCTCATGGAGCCGAAGAATTACGTAAGTCTGGAGTGTGA 963 0.4714 MDLGGVRKRGRPEAPPFNGNGGVKKSRPETESFPTGLGSKSKPCTKFFRFVVLYMIAVKSCTDNVLITSGCPFGEGCHFLHYVPGGIKAVSQMINIGTNPALPQASRNPTVPPSFPDGSSPPAVKTRLCNKYNTAEGCKFGDKCHFAHGEWELGKPTAPSYEDPRSLGQMQSRVSGRVEPPPLAHGAAASFGASATAKISINASLAGAIIGKNGVNSKQICRVTGAKLSIRDHDSDPNLKNIELEGSFDQIKQASAMVRELIVNVGSFSGPPMKITAPHASAPASNFKTKLCENFAKGSCTFGERCHFAHGAEELRKSGV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g1438 320 CDD KH-I_AtC3H36_like 198 262 - -
Enph5g1438 320 FunFam Zinc finger CCCH domain-containing protein 281 317 - -
Enph5g1438 320 Gene3D - 282 318 - -
Enph5g1438 320 Gene3D - 118 155 - -
Enph5g1438 320 Gene3D K Homology domain, type 1 190 281 IPR036612 GO:0003723
Enph5g1438 320 MobiDBLite consensus disorder prediction 1 39 - -
Enph5g1438 320 Pfam KH domain 197 260 IPR004088 GO:0003723
Enph5g1438 320 PANTHER CCCH ZINC FINGER/TIS11-RELATED 26 174 IPR045877 GO:0003729
Enph5g1438 320 ProSiteProfiles Type-1 KH domain profile. 194 258 - -
Enph5g1438 320 ProSiteProfiles Zinc finger C3H1-type profile. 286 313 IPR000571 GO:0046872
Enph5g1438 320 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 287 311 IPR000571 GO:0046872
Enph5g1438 320 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 125 150 IPR000571 GO:0046872
Enph5g1438 320 SUPERFAMILY CCCH zinc finger 122 154 IPR036855 GO:0046872
Enph5g1438 320 ProSiteProfiles Zinc finger C3H1-type profile. 123 151 IPR000571 GO:0046872
Enph5g1438 320 SMART c3hfinal6 286 312 IPR000571 GO:0046872
Enph5g1438 320 SMART c3hfinal6 57 83 IPR000571 GO:0046872
Enph5g1438 320 SMART c3hfinal6 123 150 IPR000571 GO:0046872
Enph5g1438 320 Pfam RNA-binding, Nab2-type zinc finger 71 81 - -
Enph5g1438 320 SMART kh_6 193 263 IPR004087 GO:0003676
Enph5g1438 320 FunFam Zinc finger CCCH domain-containing protein 118 155 - -
Enph5g1438 320 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 189 264 IPR036612 GO:0003723
Enph5g1438 320 SUPERFAMILY CCCH zinc finger 285 316 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g1438 Enph-Chr5 25920478 25931167 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Enph5g1438 KH_1 6.8e-11 CL0007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g1438 - - gmx:100818781 504.212