Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g0888 ATGGGCAGAAGCACATCCTTGCTAGAAGTGAACGCAGAAACCTTTTTGTCTCCCTCACAACCCACGACTTACTTTGTCTCTCCTCCCAACGTTGGATCTGAAGATTCCAATCTAAACGACAAGATTAGTCCAAGCGTCCTCCTCATCATCATAATCCTCGCCATCGTCTTCTTCGTCTCCGGTTTGCTCCATCTCCTGGTTCGATACCTGTGGAGGCCACGAACCAGAGACCCAGACGAATTAGACAATGTCACTGTTCTTCAAGGACAACTACAGCAACTGTTCCACCTCCACGATTCTGGGGTTGACCAATCCTTTATTGACACCCTCCCTGTCTTCCTCTACAAAGCTATCATCGGACTCAAGAACCCTTTCGATTGCGCCGTTTGTTTGTGCGAGTTCGAACCGGAGGACAAGCTCCGATTGTTACCCAAATGCAGCCACGCCTTTCACATGGAGTGTATCGACACGTGGCTCTTGTCCCACTCCACCTGTCCTCTCTGTCGAGGTTGTTTGCTCAATGATTCCTCATCCAGCGATGCTCATTCCCCCATTGTTCTTGTCCTTGAATCTGGGAGTGACAACTCCATAGAGATTGTTCCGGAATCAGAGGAAATCGGATCCAGGTCGACCCGGTTGGATTCGAATAACGATGAGGTTGTCACTGTGAAGCTGGGAAAGTTCAGAAATGTGGATACTAACGATGAAGGTGGTAGCAGCAGCAATCGTAATACTGATACCAATCACAATGCTGCAGACGCAAGGAGGTGTTTCTCTATGGGGTCGTTTGCTTATGTGATGGACGAGAATTCTTCGCTTCAGGTACCCATTGGAGCACAAATCAAGAAGAAGCATACTTTGCCTATAACTCCAGGACACAGGCCTGCAATGTCGGAGTGTGACTGTGAATCCAGAAGGGATCTCAGATTCCCTGGTTTGGATGGAAACGGAGCTAAAAGTACTGGAAACTCAGGCTCTGAGATTGTTACGAGAAAGGAGAGTTATTCGGTGTCGAAGATTTGGCTTCGAGGGAAGAAAGAGAAGCGCAATGGGCTTGTGGATTCGTCGAGGAGGGCCGTGTCGTTTCGGCTTCCGTTGCACGGAAACAATGGTTGGAAGGAGGAGAAGGGGAAGTCAGAATCGAGAAGTACGATCTCAGAGATGGATGTAGGGAAATGGGAAAATGAAGGAGGAAGTGAATATGGATACGAGGATGAGAACCAGAGCTGTTACAGTGTAGAATCGCAGACGATGAGAGCGCCTTCATTTGCGAGAAGGACACTGCTTTGGCTCACAGGAAGACAGAACAAGGTGGTGCATTCATCCTCTGATTCCGGCAATCTGTAG 1347 0.4863 MGRSTSLLEVNAETFLSPSQPTTYFVSPPNVGSEDSNLNDKISPSVLLIIIILAIVFFVSGLLHLLVRYLWRPRTRDPDELDNVTVLQGQLQQLFHLHDSGVDQSFIDTLPVFLYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGCLLNDSSSSDAHSPIVLVLESGSDNSIEIVPESEEIGSRSTRLDSNNDEVVTVKLGKFRNVDTNDEGGSSSNRNTDTNHNAADARRCFSMGSFAYVMDENSSLQVPIGAQIKKKHTLPITPGHRPAMSECDCESRRDLRFPGLDGNGAKSTGNSGSEIVTRKESYSVSKIWLRGKKEKRNGLVDSSRRAVSFRLPLHGNNGWKEEKGKSESRSTISEMDVGKWENEGGSEYGYEDENQSCYSVESQTMRAPSFARRTLLWLTGRQNKVVHSSSDSGNL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g0888 448 CDD RING-H2_EL5-like 126 169 - -
Enph5g0888 448 FunFam RING-H2 finger protein ATL46 89 174 - -
Enph5g0888 448 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 177 IPR013083 -
Enph5g0888 448 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Enph5g0888 448 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 39 341 - -
Enph5g0888 448 MobiDBLite consensus disorder prediction 233 250 - -
Enph5g0888 448 SMART ring_2 127 168 IPR001841 -
Enph5g0888 448 SUPERFAMILY RING/U-box 106 175 - -
Enph5g0888 448 MobiDBLite consensus disorder prediction 231 250 - -
Enph5g0888 448 Pfam Ring finger domain 126 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g0888 Enph-Chr5 7354148 7355494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph5g0888 36 443 C3H Transcription Factor Family AT2G18650 46.925 9.08e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g0888 - - pcin:129319707 628.246