Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g0833 ATGGGAAGATTGCGTTCTTTTCCTTTCTGGGGTGGAACTTATTTACTGCCTGCCGTAATCGAAGGATTCAAAGATGCAAACTTCCTTTTACAGAACTTGTCTAGCGTTAGGAAGCAGAAACCTGCTTCACCTATTTCCAGCAGAATAACAGCTCATCAGGTATCCAACATAAGATATCTTTCTAACAAGAAAATAGCTGCCAGATTACATTTCTCCAACATATATAGAACAGCTCTCAACAGAATTTTGATGGGAGAGAACATGTCAAGCATGCTATCAAGTGGAGTGGATAATGTGAACACAGAAGGTTTAGATTCAATTGCTGGTAGTTATCTCACCTGTCCAAACAAACATTTAGGACATGGTGGTAATGAATCCATTGATAAATTCAAGGGCATTGTGCCACTACAAAATGGGAACTGGGGTGCTCAGATATATCTTAACAGTCATCGGATTTGGCTTGGGACCTTCAAATCTGAAAAGGAAGCAGCAATGGCTTATGACAGCGCGGCTATTCAGCTTCGCTTTGGTGATTCACACCGGAATTTTCCTTGGACTAGCATCACTATCCAGGAGCCAAACTTCCAAAGTCAATACAGCCAAGAAGCTGTACTTGAGATGATAAAAGATGGTTCATACCAACCAAAATTTGAGGAGTTTCTGAGGGCTCGTCACCGAAATACTGAATTAGGTATTTGTGGTCTCAACTTTTTCGCAATGCAGAAAAGAGGAGGCCTCTCATGTAAGCTACTCTTTCGAAAGCTGCTGACACCAAGTGATGTGGGGAGGTTGAACAGAATTGTCATCCCCAAGAAAGATGCCACCGCATACTTCCCTGAAATTTCTCAAAGAGTGGAAGAAGATGCAAAAACCGGTGTGATTGCTGATGTGCAGGTAGATTTCTTCGACAGGATGATGAGGTCTTGGAAGTTCCGGTACTGCTACTGGAGAAGTAGCCAGAGTTTTGTGTTCACTAGGGGCTGGAGCAGGTTTGTGAAAGAGAAGCGATTGAAGGTGAATGATGTTGTTGCATTTTACTTGTGTGAATTTGGAAGAGGAGGAAATATAGTGGAGAAGTTCTTCATGATTGATCCTTTTTGGGGTGAAGACTGTGGTGGCAGCAGCAGCAGCTCCTCAGTGGTTGAAGGTGCTTACCATAATGTTGGGTTCAAACCTGAACTGTTGACCACAGTATTAAAAGGTGCTGATCACAATGTCGGGTTGAAACCTGAAATGTTCATGTCAGCATATGATGTTGGCGATGATCACAATGTTGGGTGGAAACCTGAACTGCATACTTCATCATTTGAAAGTGCTGATAACAGTGTTGGGTTGAAAGCTGAAATGCCTGGCTTAGTATTTGAAGGTGCTGATCACCATCTTGAGCTGAAACCTCAACTGTGCTCAGATGTTGAGAGAAAGCTTGAAGAGGGAATGATGGAAGTTGACCCACCAAGCAATATTGAGAGGAAAGGGTTTAGACTCTTTGGGGTTCAAATCAATTGA 1506 0.4263 MGRLRSFPFWGGTYLLPAVIEGFKDANFLLQNLSSVRKQKPASPISSRITAHQVSNIRYLSNKKIAARLHFSNIYRTALNRILMGENMSSMLSSGVDNVNTEGLDSIAGSYLTCPNKHLGHGGNESIDKFKGIVPLQNGNWGAQIYLNSHRIWLGTFKSEKEAAMAYDSAAIQLRFGDSHRNFPWTSITIQEPNFQSQYSQEAVLEMIKDGSYQPKFEEFLRARHRNTELGICGLNFFAMQKRGGLSCKLLFRKLLTPSDVGRLNRIVIPKKDATAYFPEISQRVEEDAKTGVIADVQVDFFDRMMRSWKFRYCYWRSSQSFVFTRGWSRFVKEKRLKVNDVVAFYLCEFGRGGNIVEKFFMIDPFWGEDCGGSSSSSSVVEGAYHNVGFKPELLTTVLKGADHNVGLKPEMFMSAYDVGDDHNVGWKPELHTSSFESADNSVGLKAEMPGLVFEGADHHLELKPQLCSDVERKLEEGMMEVDPPSNIERKGFRLFGVQIN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g0833 501 CDD AP2 129 186 IPR001471 GO:0003700|GO:0006355
Enph5g0833 501 ProSiteProfiles B3 DNA-binding domain profile. 252 364 IPR003340 GO:0003677
Enph5g0833 501 SUPERFAMILY DNA-binding pseudobarrel domain 250 351 IPR015300 -
Enph5g0833 501 SUPERFAMILY DNA-binding domain 129 185 IPR016177 GO:0003677
Enph5g0833 501 ProSiteProfiles AP2/ERF domain profile. 129 184 IPR001471 GO:0003700|GO:0006355
Enph5g0833 501 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 128 500 IPR044800 GO:0003700
Enph5g0833 501 CDD B3_DNA 251 347 IPR003340 GO:0003677
Enph5g0833 501 Pfam B3 DNA binding domain 252 349 IPR003340 GO:0003677
Enph5g0833 501 SMART B3_2 252 364 IPR003340 GO:0003677
Enph5g0833 501 SMART rav1_2 129 190 IPR001471 GO:0003700|GO:0006355
Enph5g0833 501 FunFam AP2 domain-containing protein RAP2.8 128 185 - -
Enph5g0833 501 Gene3D - 243 360 IPR015300 -
Enph5g0833 501 Gene3D AP2/ERF domain 128 185 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g0833 Enph-Chr5 6859741 6868432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph5g0833 129 373 RAV Transcription Factor Family AT1G50680 54.753 4.85e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Enph5g0833 B3 2.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g0833 K09287 - qsu:111989187 356.681