Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g0512 ATGGCAACATTTGGTGGTACTACTCAGAAGTGCAAGGCCTGTGAGAAGACCGTCTATTTGGTTGATCAGCTCACTGCTGACAACAAAATTTACCACAAGTTCTGCTTCAGATGTCAACACTGCAAGGGTACCCTCAAGCTGAGTAATTATTGTTCCTTTGAGGGCGTTTTATACTGCAAGCCTCATTATGATCAACTCTTGAAAATGACTGGAAGCTTAGAAAAAAGCTTTGAAGGAGTTCCAAGAACTGCTAGAGTTGTCAGATCAGCTGATCAGGTCCAAACCAATGGCAGGGTTTCAAGATTATTTGTTGGAACTCAGGAAAAGTGTGTTGCTTGCAAGAAGACAGTCTACCCAATCGAAAAGGTGGCCGTTGATGGCAAATCTTACCACAAGATTTGCTTCAGGTGCTCCCATGGAGGATGTGTGATCAGCCCATCAAACTATGTGGCCCATGAACACCGTCTCTACTGTAGACACCACCATACTCAGCTCTTCAAGCAGAAGGGTAACTTCAGTCAACTTGATCGGCATGAAAATGAAAATGAAAATGAAAAGGAAAAGGAAAAGGAAAATGAAAAGGAAAAGAAAAAGGGAAAATGA 603 0.4229 MATFGGTTQKCKACEKTVYLVDQLTADNKIYHKFCFRCQHCKGTLKLSNYCSFEGVLYCKPHYDQLLKMTGSLEKSFEGVPRTARVVRSADQVQTNGRVSRLFVGTQEKCVACKKTVYPIEKVAVDGKSYHKICFRCSHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDRHENENENEKEKEKENEKEKKKGK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g0512 200 ProSitePatterns LIM zinc-binding domain signature. 11 45 IPR001781 -
Enph5g0512 200 SMART lim_4 10 62 IPR001781 -
Enph5g0512 200 SMART lim_4 109 161 IPR001781 -
Enph5g0512 200 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 102 135 - -
Enph5g0512 200 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 36 - -
Enph5g0512 200 FunFam LIM domain and actin-binding 1 104 174 - -
Enph5g0512 200 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 37 77 - -
Enph5g0512 200 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 136 174 - -
Enph5g0512 200 MobiDBLite consensus disorder prediction 172 200 - -
Enph5g0512 200 Coils Coil 175 200 - -
Enph5g0512 200 MobiDBLite consensus disorder prediction 169 200 - -
Enph5g0512 200 Gene3D Cysteine Rich Protein 6 75 - -
Enph5g0512 200 Gene3D Cysteine Rich Protein 104 174 - -
Enph5g0512 200 Pfam LIM domain 11 64 IPR001781 -
Enph5g0512 200 Pfam LIM domain 110 165 IPR001781 -
Enph5g0512 200 ProSiteProfiles LIM domain profile. 108 168 IPR001781 -
Enph5g0512 200 CDD LIM2_SF3 110 170 - -
Enph5g0512 200 FunFam LIM domain and actin-binding 1 5 75 - -
Enph5g0512 200 ProSiteProfiles LIM domain profile. 9 69 IPR001781 -
Enph5g0512 200 PANTHER OS06G0237300 PROTEIN 4 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g0512 Enph-Chr5 4189717 4193752 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Enph5g0512 LIM 1.9e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g0512 K09377 - gmx:100500444 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph6g0631 6 9529758 9533038 Enph5g0512 5 4189717 4193752 CCT
Enph5g0512 5 4189717 4193752 Enph5g0512 5 4189717 4193752 ECH