Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g0442 AATCATGCCTTCTTTCTCTGCCCTCACTCTCGTGCAACAAAACCAAACATCCCCATTTCTCAATTCCTACTAAACCCCTCAAGCTTCATCTCTCGTACTCCAACTCCTCTCTTTTCACCATCTCTATCTCTCATCAGTAAAAATCACTTTTCCTCTATTTCGACATTTCATATACATCGGATTGGGCTCATCAAGAAGTTGACAGCACAGTCACCATTGAAGATGATGAACCTGCGTGGGAAAATCAAGAGTTCTACCCAAGCTCGCCTTTCGGACTGGGAGGCTGGGGCTGAGGGAGAAGACGCAGGAATCAACGGTGGTGAGGACGAAGAAGAGAGCGGTCAAGACGGAGCTTTTGAGGAGAGTGAATATGTAGAACCGTCTGAAGATGCGAAAATCTTTGTCGGTAACTTGCCTTGCGATGTTGATAGTCAAAAATTGGCCATGCTTTTTGATGCAGCTGGAACAGTCGAAATTGCCGAGGCGAGATTTTCCACTCCTAACGACTTTATGGAATTAGAGGCTTCAATGTCTTACGAAGTTATATATAATAGGGAGACTGGCCAAAGTCGTGGTTTCGGATTTGTAACGATGAGTACAGTTGAAGAAGCCGATGAGGCTGTTGAAAAGTTCAGCCGCTACGATTTAGATGGAAGGCTACTAACTGTTAACAAGGCTGCTCCAAGAGGATCACGGCCTGAACATCCACCTCGCGCCTTTGAACCTGCTTTCAGTATCCACGTCGGGAACTTGCCATGGGATGTTGATAATGATCGTCTGGAGCAAATCTTCAGTGAACATGGTAAGATTGTGAATGCTCGGATAGTTTGTGACAGAGAGACTGATCGATCACGTGGTTTTGGCTTCGTTACAATGGTCAGTGAGACTGAAATGAATGAAGCTATTGCTGCTCTTGATGGTCAGAGTATGGATGGGAGAGCAATCAGAGTGAGTGTTGCTGAGGAAAGGCCCAGGCGTAGCTCCTTCTGA 990 0.4596 NHAFFLCPHSRATKPNIPISQFLLNPSSFISRTPTPLFSPSLSLISKNHFSSISTFHIHRIGLIKKLTAQSPLKMMNLRGKIKSSTQARLSDWEAGAEGEDAGINGGEDEEESGQDGAFEESEYVEPSEDAKIFVGNLPCDVDSQKLAMLFDAAGTVEIAEARFSTPNDFMELEASMSYEVIYNRETGQSRGFGFVTMSTVEEADEAVEKFSRYDLDGRLLTVNKAAPRGSRPEHPPRAFEPAFSIHVGNLPWDVDNDRLEQIFSEHGKIVNARIVCDRETDRSRGFGFVTMVSETEMNEAIAALDGQSMDGRAIRVSVAEERPRRSSF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g0442 329 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 177 221 IPR000504 GO:0003723
Enph5g0442 329 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 247 316 IPR000504 GO:0003723
Enph5g0442 329 SUPERFAMILY RNA-binding domain, RBD 127 238 IPR035979 GO:0003676
Enph5g0442 329 SMART rrm1_1 245 318 IPR000504 GO:0003723
Enph5g0442 329 SMART rrm1_1 132 224 IPR000504 GO:0003723
Enph5g0442 329 MobiDBLite consensus disorder prediction 87 122 - -
Enph5g0442 329 FunFam 31 kDa ribonucleoprotein, chloroplastic 234 328 - -
Enph5g0442 329 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 244 322 IPR000504 GO:0003723
Enph5g0442 329 MobiDBLite consensus disorder prediction 103 122 - -
Enph5g0442 329 Gene3D - 234 328 IPR012677 -
Enph5g0442 329 Gene3D - 80 233 IPR012677 -
Enph5g0442 329 CDD RRM2_NsCP33_like 246 320 - -
Enph5g0442 329 SUPERFAMILY RNA-binding domain, RBD 236 327 IPR035979 GO:0003676
Enph5g0442 329 PANTHER OS02G0815200 PROTEIN 67 325 - -
Enph5g0442 329 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 131 228 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g0442 Enph-Chr5 3492149 3494535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph5g0442 129 326 Eukaryotic Initiation Factors Gene Family AT3G16380 31.401 4.34e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g0442 - - qsa:O6P43_030799 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph6g0534 6 8731243 8734374 Enph5g0442 5 3492149 3494535 CCT
Enph6g0534 6 8731243 8734374 Enph5g0442 5 3492149 3494535 ECH
Enph5g0442 5 3492149 3494535 Enph5g0442 5 3492149 3494535 ECH