Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph5g0226 ATGGACTTTGACGAATACGATTACTTGGAGAAGACAGTGGAGGAGCAGGAAGATCGAGATTCGACGAAGAAGAAGAAGGAGAGCAGCGAGAAGAGTGAAAGGAGTTACAGGAAGCGCGAGGCCGATGAGAATCTGGATGGTGATGACAAGAAGAGCAAGAGGACCAGAGGCGACGAGGTGAATGGGTCAAAGAAGGATCGTGATGACCGCGACAGAGAACGGTTTAGCCGCGAAAAGGAGCGCCATAGGAGTGGCAGGGATAGGGATGGGGTGAGAGATGGAGAGAGAGAGCGAGAGAGGAGTAGCAGAGAGAAGGATAGGGAGAAGGAGAGAGACAAAGAGAGGGATAAGAATAGGGAGAGGGAAAGGGAAAGAAGGGACAAAGAGAGGGAGCGGGATACAGAAAGAGAGAGGGAGAGGGGAGAAAGGGAAAGAGAACGGGAGAGGGAGGAGAGAGAAAGATCCCGGAGAAGCAGAAGTCGTTCTGATAGAGATAGAGAACGAGAATTGGAAATTAGAGATAGCCGGAGATTTAGGGACAAGAAAGAGGCTGTGGAGCCTGAGGCAGATCCAGAAAGGGATCAGAGAACTGTTTTTGCATACCAGATGCCCTTGAAGGCAACAGAGAGAGATGTTTATGAATTTTTCTCAAAAGCTGGGAAGGTGAGGGATGTGCGTCTGATCATGGATAGGAATTCTAGACGGTCTAAAGGAGTTGGCATTGCGATAATGATGAGGGATGATGGGAATACCATGCACTCATGTTTAATCAATTCATGCTGCGTACGCAAGGCTGTTGGGTTATTCCTTAATATGGTTGAGGGTCATATATATGGGGGATTTTTTTACTCTTCCATTTCCTTTTTCATTTTGGAGGAAGGTGATGGTTGGTGCGGTATATTAGAGATGCTTATGGATTTGGTGTCGCTAACCTTTTCTTTACATGAGTCAGATACATCAAAAGAAACTCAGCTTGAGCTGTCTGCACTAGAGTTTTTGTTTCCCTACATCTCTTTGCTGTATGCATTGTATATTGAATTTTATGATGCCATGTCAGTGCCGATGGCAATTGCTCTCTCTGGTCAATTGCTTCTTGGACAACCTGTAATGGTCAAACCTTCTGAAGCTGAAAAGAACCTTGTTCAGTCTAATGCTTCCACTGGAGCTGCAGGTGTAGCAGGACCATATGGAGCAGTAGACAGGAAACTTTATGTGGGAAACCTTCATTTCAACATGACAGAGAGTCAGCTGAGGGAGATTTTTGAGCCGTTTGGTCCAGTGGAGCTTGTGCAACTGCCTCTTGACCTGGAGACAGGACATTGCAAGGGTTTTGGCTTTATTCAATTTGCCCATCTTGAACATGCCAAAGCAGCTCAGAGTTTAAATGGAAAACTGGAGATTGCTGGGAGGACTATCAAGGTTTCATGTGTGACAGATCACATTGGTAGCCAAGATACAAGTGCAAAATCAGCAGACTTTGATGATGATGAAGGTGGATTGGTAAGTGGAAACAAGGGAAAGTGTGTTTCCCAAAGACGGGCCTTAAATGCTCAGTCAAGAGCATTGCTTATGCAGAAGCTGGATCGATCTGGCACTGCCACAAGCATTGCAGGGTCTGTTGGTGTGCCCATTGTGAATGGGTCAGTTACTGCTCAACAGTCTGTTAGCTTGCCTAGTGCCCCTGGTGTAATGCCTGCACCGTTTCTCCCAACACAAATCATGCCTGCACCTGTGGTAGAACCTGTTGGAAGCCCTAGCGAGTGTCTACTGTTGAAAAATATGTTTGATCCTGCTACTGAGACAGAACCAGATTTTGATATTGACATTAAGGAGGATGTAGAAGAAGAATGCTCTAAATTTGGCCGGGTGAAGCATATTTATGTGGACAAAAGAAGTGCAGGTTTTGTATATTTGTGGTTTGAAACAGTGGAAGCTGCAAGTTCTGCTCAACAAGCAATGCATATGAGATGGTTTGCTCGCAGGTTGATTTCAGCTGTTTTCATGCAACCCCAGATATATGAGGCCAAGTTTAAAGTGGAAGCTTGA 2046 0.456 MDFDEYDYLEKTVEEQEDRDSTKKKKESSEKSERSYRKREADENLDGDDKKSKRTRGDEVNGSKKDRDDRDRERFSREKERHRSGRDRDGVRDGERERERSSREKDREKERDKERDKNRERERERRDKERERDTERERERGEREREREREERERSRRSRSRSDRDRERELEIRDSRRFRDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGIAIMMRDDGNTMHSCLINSCCVRKAVGLFLNMVEGHIYGGFFYSSISFFILEEGDGWCGILEMLMDLVSLTFSLHESDTSKETQLELSALEFLFPYISLLYALYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASTGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVELVQLPLDLETGHCKGFGFIQFAHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHIGSQDTSAKSADFDDDEGGLVSGNKGKCVSQRRALNAQSRALLMQKLDRSGTATSIAGSVGVPIVNGSVTAQQSVSLPSAPGVMPAPFLPTQIMPAPVVEPVGSPSECLLLKNMFDPATETEPDFDIDIKEDVEEECSKFGRVKHIYVDKRSAGFVYLWFETVEAASSAQQAMHMRWFARRLISAVFMQPQIYEAKFKVEA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph5g0226 681 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 241 IPR000504 GO:0003723
Enph5g0226 681 MobiDBLite consensus disorder prediction 12 168 - -
Enph5g0226 681 PANTHER SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED 1 677 IPR006509 GO:0003723|GO:0005634|GO:0006397
Enph5g0226 681 FunFam Splicing factor, CC1-like protein 582 681 - -
Enph5g0226 681 NCBIfam splicing factor, CC1-like family 344 677 IPR006509 GO:0003723|GO:0005634|GO:0006397
Enph5g0226 681 CDD RRM2_RBM23_RBM39 403 480 - -
Enph5g0226 681 CDD RRM3_RBM39_like 586 668 - -
Enph5g0226 681 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 401 479 IPR000504 GO:0003723
Enph5g0226 681 Pfam linker between RRM2 and RRM3 domains in RBM39 protein 514 605 IPR029123 -
Enph5g0226 681 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 403 473 IPR000504 GO:0003723
Enph5g0226 681 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 610 663 IPR000504 GO:0003723
Enph5g0226 681 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 203 241 IPR000504 GO:0003723
Enph5g0226 681 SUPERFAMILY RNA-binding domain, RBD 583 669 IPR035979 GO:0003676
Enph5g0226 681 SUPERFAMILY RNA-binding domain, RBD 400 479 IPR035979 GO:0003676
Enph5g0226 681 Gene3D - 583 681 IPR012677 -
Enph5g0226 681 Gene3D - 397 492 IPR012677 -
Enph5g0226 681 Coils Coil 91 158 - -
Enph5g0226 681 FunFam Splicing factor CC1-like 385 490 - -
Enph5g0226 681 Gene3D - 189 386 IPR012677 -
Enph5g0226 681 SUPERFAMILY RNA-binding domain, RBD 187 244 IPR035979 GO:0003676
Enph5g0226 681 SMART rrm1_1 588 665 IPR000504 GO:0003723
Enph5g0226 681 SMART rrm1_1 402 475 IPR000504 GO:0003723
Enph5g0226 681 SMART rrm1_1 197 260 IPR000504 GO:0003723
Enph5g0226 681 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph5g0226 Enph-Chr5 1884735 1891104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph5g0226 381 474 Eukaryotic Initiation Factors Gene Family AT4G34110 35.789 1.66e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph5g0226 K13091 - gmx:100802446 535.028