Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph4g2061 | ATGCGAGGGAATAAGAGAGAAATTACCAAGACAGACATCAAGGCGTCTCCGACCAATCCCACCGATGCTCCGAAGCGGGGCTCGTTTAGCGATTCCGACACTTTCTACAACAAACTCAGCCAGGTGTGGGAGTCCCATGGGCTCGGTCTAATTATTAATGCCCGAGAAACATTGCTGGACTTGTTCCTCTTCTACTCAGAGGTGACTAGAAGAGGAGGATATCATCAGGTGAGCAGAGATCGGAAATGGGATGAACTTGTCTCTGCCTTAAAATTGGAGGGCAGTGATCCTAAGTTACCTGTTCAACTTGAAAAGTGCTACGCTCTCCTTCTTTACCAGTTTGAGCAACTCTACCACTACAGGGATCCAGTACATAAAGCTACTGTCAACACCGCCTTAGGTCTGCTCACTGATGGCATAAGCTCAGAAAGGAAGCGAAAATCTGAGGCTTGTTTATCTGAATCAATGGATAATGAATATGGTAAAGTGGAGACAAAGATGTGCAAGAAAACGACAGATATCTATATGATATTTGAGATTGAAATGCGACTTAAAGCAGGGACCAAGCTTGCAGAACAGCAAGGGTTGCTGCTGGTGCCGCCAAAGGACAAGAAAGCAAAGAAACGCCGGGGTGCTCCACAGAGACATAAAAATGCATATCAGATATTCATCAAGCAGGAATGTGCTCGATTGAGAAGCTGCAACGAGGCATCAGCTGGCTCAAATATTCTACACGTGGCCATTGATGCTTGGAAGAAGTTGACTGAGATTGAGAGACAGCCATTTGTGGAACAAAGCAAGAAGGAGAAGGAACGACTTGTGGAAGAGTCAAACGCTTGGAATCAGAATGAAGAGCAGAATGTTGAGGCTGGTGTTGATATTGGTGACTACCGTGTGACTCTACAACCTGATGCAGAGAACTCCGGTGATGGCTTAGCATGTCGAATGAGTGAAGAGCCCAAAGATCCATTAACTATTGACTATGGTGCTTCCTTTTCATCGGATATACCAAGTGAAGCATGA | 1023 | 0.4545 | MRGNKREITKTDIKASPTNPTDAPKRGSFSDSDTFYNKLSQVWESHGLGLIINARETLLDLFLFYSEVTRRGGYHQVSRDRKWDELVSALKLEGSDPKLPVQLEKCYALLLYQFEQLYHYRDPVHKATVNTALGLLTDGISSERKRKSEACLSESMDNEYGKVETKMCKKTTDIYMIFEIEMRLKAGTKLAEQQGLLLVPPKDKKAKKRRGAPQRHKNAYQIFIKQECARLRSCNEASAGSNILHVAIDAWKKLTEIERQPFVEQSKKEKERLVEESNAWNQNEEQNVEAGVDIGDYRVTLQPDAENSGDGLACRMSEEPKDPLTIDYGASFSSDIPSEA | 340 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph4g2061 | 340 | CDD | ARID | 31 | 115 | - | - | |
| Enph4g2061 | 340 | Pfam | HMG-box domain | 213 | 280 | IPR009071 | - | |
| Enph4g2061 | 340 | MobiDBLite | consensus disorder prediction | 13 | 29 | - | - | |
| Enph4g2061 | 340 | Coils | Coil | 263 | 283 | - | - | |
| Enph4g2061 | 340 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Enph4g2061 | 340 | CDD | HMG-box_SF | 215 | 272 | - | - | |
| Enph4g2061 | 340 | ProSiteProfiles | ARID domain profile. | 29 | 119 | IPR001606 | GO:0003677 | |
| Enph4g2061 | 340 | MobiDBLite | consensus disorder prediction | 301 | 340 | - | - | |
| Enph4g2061 | 340 | SUPERFAMILY | HMG-box | 198 | 282 | IPR036910 | - | |
| Enph4g2061 | 340 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 23 | 285 | - | - | |
| Enph4g2061 | 340 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 213 | 281 | IPR009071 | - | |
| Enph4g2061 | 340 | Gene3D | - | 18 | 131 | IPR036431 | GO:0003677 | |
| Enph4g2061 | 340 | Gene3D | High mobility group box domain | 203 | 292 | IPR036910 | - | |
| Enph4g2061 | 340 | SUPERFAMILY | ARID-like | 28 | 121 | IPR036431 | GO:0003677 | |
| Enph4g2061 | 340 | SMART | hmgende2 | 212 | 282 | IPR009071 | - | |
| Enph4g2061 | 340 | SMART | bright_3 | 30 | 120 | IPR001606 | GO:0003677 | |
| Enph4g2061 | 340 | SMART | ARID_2 | 26 | 115 | - | - | |
| Enph4g2061 | 340 | Pfam | ARID/BRIGHT DNA binding domain | 32 | 115 | IPR001606 | GO:0003677 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph4g2061 | 59 | 272 | ARID Transcription Factor Family | AT1G55650 | 25.000 | 1.14e-13 | 69.3 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | ARID | Enph4g2061 | ARID | 3.7e-12 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph4g2061 | - | - | pcin:129307373 | 434.876 |