Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g2000 ATGCCATGCTTGCCGTTTACAAAGCTGGAGAACCTTAGTAACCACCCGGATCAAAGAGCCACCGGGAACGGCCTACCCCATCACCCTCACAGTCATCCAATACGCCCTCATATCCATGATCAGTTTTTCAACCATTGCAACTTTCAACAGCCGAACGGCCCGGATAATCACCTCCCTGGTAACTTCACTTACCCCCATGTCCCTGGCAATGGCTTTGCTAACCATAATCAACCTTATAACCACTATAACCACATGAATGGCGAGCCAAATAACTCGTTCGGCGCTGGAGGACTTCCCTCTACTAATGGTGACTCTGGATATGGTTTTAACCATCCCATGCCTCGTCCGGGACGGAAACGAGGCTGGCATCTCCTCTCTAACCAAGGAACTTCTCCAGATCAAGTTGACGGTGCTCATCATGTGAAACTATATGTTGCCCCAGTTCCAAGAACATCAACAGAAACTGATATCCGCCTTGTGTTTGAAGGACATGGAACTATTGTTGAAGTTGTCCTTTTGAGGGATAAGAAAACTGGTGAAAGACAAGGAAGTTGCTTTGTGAAATTTGCAACGTTAGATGAAGCTGAGAGAGCTATCAAAGCTCTAAGCAATCAATATACTTTTCCTGGGGAGTTGTCACCCATTGTTGTCAGATTTGCTGACCGAGAACGTGAGCGTCTTGGGATTCGAGGGTTCTCCCAAATTGCGGTGGACAAAGTGTTTGTCAGTTGCATCAACAAAGAAGCTTCAAAAAAGGAAATTGAAGAAGTATTTTCCCCTTATGGACATGTGGAGGATATCTTCATTGCACAAACTCGTGGATATTGTTTTGTCAAATTTTCAAATAGAGATATGGCCTTGGCAGCAATCAAAGGGCTGAACAATACATTCACAATGAGGGGTTGTGATCATCCATTAATTGTTCGATTTGCGGATCCTAAGAAACCTAAGACTGGGGAACCCAGGCCGCAACCAAACTTTGGTGATTCCATTGGAGGGAGTAATCTGCCTTTGGTTCCACATCATTCCACAATTCCACACCCACAAGTTGCTCCACATTTTCAAAACTGGGAACCTACTAATACTATGATGCAACAACCATTTCCTTCTGAACAAGCACATCTACAATTGGCTCCAATACCCTCACAACCGATCCAGGTTCAAAAGATATCCTCTCAGTCAGTTGTTACCGAGGTGCTAAAACTGTCACATCCAACAGATTCATCAACTCCAAATGTAGAGCAGCAGATAAATTCACAGCCTGCCCAGACCGGAAGCAATCCTTGTGCTGTTGCTGGCAGTACTTCACCAGATATGCCAGAAAGTTCTGATGAAGGCGAAGAAGTATTTCCAGAGTGTGACTGGAGTGAACACACCTGTCCTGACGGCTATAAGTATTACTACAATTGCGTGACTTGTGAAAGTAAGGAAACTTGTGATAGAATATCTCTACTTGCTCTTATCGAGGATCTACATTCTGAGATCACAATTATTATTGGAAGCGCTTCCAACATCTGA 1518 0.4433 MPCLPFTKLENLSNHPDQRATGNGLPHHPHSHPIRPHIHDQFFNHCNFQQPNGPDNHLPGNFTYPHVPGNGFANHNQPYNHYNHMNGEPNNSFGAGGLPSTNGDSGYGFNHPMPRPGRKRGWHLLSNQGTSPDQVDGAHHVKLYVAPVPRTSTETDIRLVFEGHGTIVEVVLLRDKKTGERQGSCFVKFATLDEAERAIKALSNQYTFPGELSPIVVRFADRERERLGIRGFSQIAVDKVFVSCINKEASKKEIEEVFSPYGHVEDIFIAQTRGYCFVKFSNRDMALAAIKGLNNTFTMRGCDHPLIVRFADPKKPKTGEPRPQPNFGDSIGGSNLPLVPHHSTIPHPQVAPHFQNWEPTNTMMQQPFPSEQAHLQLAPIPSQPIQVQKISSQSVVTEVLKLSHPTDSSTPNVEQQINSQPAQTGSNPCAVAGSTSPDMPESSDEGEEVFPECDWSEHTCPDGYKYYYNCVTCESKETCDRISLLALIEDLHSEITIIIGSASNI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g2000 505 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 238 313 IPR000504 GO:0003723
Enph4g2000 505 SMART rrm1_1 239 309 IPR000504 GO:0003723
Enph4g2000 505 SMART rrm1_1 142 218 IPR000504 GO:0003723
Enph4g2000 505 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 143 209 IPR000504 GO:0003723
Enph4g2000 505 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 240 298 IPR000504 GO:0003723
Enph4g2000 505 Gene3D - 451 479 - -
Enph4g2000 505 Gene3D - 130 227 IPR012677 -
Enph4g2000 505 MobiDBLite consensus disorder prediction 404 440 - -
Enph4g2000 505 MobiDBLite consensus disorder prediction 404 449 - -
Enph4g2000 505 MobiDBLite consensus disorder prediction 312 345 - -
Enph4g2000 505 SUPERFAMILY RNA-binding domain, RBD 238 334 IPR035979 GO:0003676
Enph4g2000 505 SUPERFAMILY WW domain 454 475 IPR036020 GO:0005515
Enph4g2000 505 MobiDBLite consensus disorder prediction 1 38 - -
Enph4g2000 505 Gene3D - 233 319 IPR012677 -
Enph4g2000 505 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 141 222 IPR000504 GO:0003723
Enph4g2000 505 SUPERFAMILY RNA-binding domain, RBD 125 229 IPR035979 GO:0003676
Enph4g2000 505 PANTHER RNA BINDING PROTEIN 57 376 - -
Enph4g2000 505 CDD WW 453 479 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g2000 Enph-Chr4 32200717 32209950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g2000 143 317 Eukaryotic Initiation Factors Gene Family AT1G71770 24.064 2.50e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g2000 K13207 - gmx:100795107 498.434