Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g1907 ATGAGTGAGAAGGAGCCCACTGACACAGAGACAGGGGAGAGAGAGCTCACCTGGGCATTGATGGCGGAGGAGAAGGATGAGAAAAAATCGAGCGAGGAAAGAGTGAAACTGTTTGTAGGTCAAGTGCCCAAGCAAATGACCGAAGATGAGCTGCTTGCATTGTTTAAGGAGTTTGCTGTAGTGGACGAGGTCAATATCATCAACGATAAAGCTACTCGCTCCCCTCGAGGGTGTTGCTTTGTATTTTGTCCGTCCCGGGAAGAGGCAGATAAAGTAGTTAATGCGTGTCATAATAAGAAAATGATACCTTGGGTTGGTGCTATCTTCACATCTTATTATGGATCGAGTTTATCTTCACATCTTAGGATTGCATCTAGCCCGTTGCAAGTGAAGTATGCAGATGGCGAGTTGGAAAGGCTAGAACACAAACTCTTCATCGGTATGCTTCCAAAGAATGTTTCTGAAGTTGAATTATCAGCTCTTTTCTCTAAATACGGAGCTATAAAGGATTTACAGATTTTAAGAGGCTCTCAGCAGGCAAATAAAGGTTGTGCATTTTTGAAGTTTGAGACCAAAAAACAGGCCCTTGCTGCCCTGGAGGAAATCAATGGAAAGTATAAAATGGAGGGTTCAAGTGCTCCTTTGGTTGTCAAATGGGCAGATACTGAAAAGGAAAGGCAAGCTCGGAGGGCTCAGAAAGTACGGTCCCAAACATATAGTTTGCCACATACTAATTCTCAGCATCCATCATTGTTTGGAGCTCTGCCAATGGGTTATGTTCCTCCATATAATGGATATGGTTATCAGACTGCTGGGGGTTATGGGTTCATGCTATATCGCCTGCCACCAATGCAGAATCAACCTGGTTTCCATAAAATGATGCCTCACATGAATCAAGGAAATGCATTGCAGCCTAATCTTGTCTCCAATATGAACCCTAGAAATTATCCCATGCCGCATGCAAGTTATGTTGGTTCATATCCTGCAGCAGCACCAGCTCTACAGCATCCGATGGTGTATCCCGGAGGAATGATAGGTCCTAGGTTTTTGAAGAGCTCCTCAACTGCTGGGAACAGTGACTCTGCTACCTCTTCATGGGCCAGACCACCTGGTGCCAATCTCTTTATTTATCACATACCACAAGAATTTGGAGATCAGGAGCTTGAAGTTTCCTTTCAACCATTTGGTAGAGTTTTGAGTGCTAAGGTTTTTGTTGATAAAACAACTGCTGAGTCTCCAGAAGCAGCTCAAGCAGCTATTAGGAGGATGAATGGATGCGAATTAGGTGGCAAGAAAATAAAGGTTCAGCTTAAGAGGGACAACAACAAACAGAGGAAGTCTTGTTGA 1347 0.4388 MSEKEPTDTETGERELTWALMAEEKDEKKSSEERVKLFVGQVPKQMTEDELLALFKEFAVVDEVNIINDKATRSPRGCCFVFCPSREEADKVVNACHNKKMIPWVGAIFTSYYGSSLSSHLRIASSPLQVKYADGELERLEHKLFIGMLPKNVSEVELSALFSKYGAIKDLQILRGSQQANKGCAFLKFETKKQALAALEEINGKYKMEGSSAPLVVKWADTEKERQARRAQKVRSQTYSLPHTNSQHPSLFGALPMGYVPPYNGYGYQTAGGYGFMLYRLPPMQNQPGFHKMMPHMNQGNALQPNLVSNMNPRNYPMPHASYVGSYPAAAPALQHPMVYPGGMIGPRFLKSSSTAGNSDSATSSWARPPGANLFIYHIPQEFGDQELEVSFQPFGRVLSAKVFVDKTTAESPEAAQAAIRRMNGCELGGKKIKVQLKRDNNKQRKSC 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g1907 448 SMART rrm1_1 143 218 IPR000504 GO:0003723
Enph4g1907 448 SMART rrm1_1 373 436 IPR000504 GO:0003723
Enph4g1907 448 SMART rrm1_1 36 106 IPR000504 GO:0003723
Enph4g1907 448 PANTHER RNA BINDING PROTEIN 34 442 - -
Enph4g1907 448 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 372 440 IPR000504 GO:0003723
Enph4g1907 448 SUPERFAMILY RNA-binding domain, RBD 142 443 IPR035979 GO:0003676
Enph4g1907 448 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 100 IPR000504 GO:0003723
Enph4g1907 448 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 144 206 IPR000504 GO:0003723
Enph4g1907 448 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 374 434 IPR000504 GO:0003723
Enph4g1907 448 SUPERFAMILY RNA-binding domain, RBD 22 101 IPR035979 GO:0003676
Enph4g1907 448 CDD RRM3_CELF1-6 374 436 - -
Enph4g1907 448 Gene3D - 139 230 IPR012677 -
Enph4g1907 448 Gene3D - 351 447 IPR012677 -
Enph4g1907 448 FunFam RNA-binding protein BRN1 22 138 - -
Enph4g1907 448 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 135 IPR000504 GO:0003723
Enph4g1907 448 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 142 222 IPR000504 GO:0003723
Enph4g1907 448 Gene3D - 21 138 IPR012677 -
Enph4g1907 448 PRINTS Paraneoplastic encephalomyelitis antigen family signature 162 174 IPR002343 GO:0003723|GO:1990904
Enph4g1907 448 PRINTS Paraneoplastic encephalomyelitis antigen family signature 147 162 IPR002343 GO:0003723|GO:1990904
Enph4g1907 448 PRINTS Paraneoplastic encephalomyelitis antigen family signature 35 50 IPR002343 GO:0003723|GO:1990904
Enph4g1907 448 PRINTS Paraneoplastic encephalomyelitis antigen family signature 203 220 IPR002343 GO:0003723|GO:1990904
Enph4g1907 448 FunFam RNA-binding protein BRN1 isoform X1 139 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g1907 Enph-Chr4 31464324 31468358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g1907 25 338 Eukaryotic Initiation Factors Gene Family AT2G23350 27.301 9.26e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g1907 K13207 - gmx:100813239 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph2g1448 2 12658396 12663238 Enph4g1907 4 31464324 31468358 CCT
Enph4g1907 4 31464324 31468358 Enph4g1907 4 31464324 31468358 ECH