Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g1500 ATGAGGGATTCGAAGAAGAGGAAGCTAAATGAAGCCGAAAACGTGGATCTTTCTTCCAAGGAAGAGTTGCTTTTGCTGCTCGACCCGCTATCTAAATCCCAGCTCGTCAACCTTCTAGTCAATCTGGGGGCCCGATATCCTTCAGTTGCAGAAGAAATAAAAAGAATTGCAAGTGCAGATCTTGCCCATCGAAAGCTTTTTGTTCGTGGCTTGGCCTTTGATACCACTTCAGAAACCTTGCGTGCTGTGAGTGCATTGTTGATTGCGTTTCAAGAGCATGGAGAAATTGTGGAAGCGACTGTGATCTATGATGACGCAACAGGGGAATCTCGTGGCTATGGTTTTATCATTTACAAACATATGGAATCAGCTCAGCTAGCTTTGAGAGCACCAGTCAAATTAATTAATGGCAGAATGGTTGCATTCAATCTCGCTCATGAGAACTTTAGAGCAAGTAGTGCTCCTGATCTTTCCTTGAGGAAGCTGTTCATTGGAAGATTATCAGATGCAGTCACAACTGAAATGCTTCTTAGCTTTTTTGGAAGACATGGTCAAATCGAGGAAGGTTCAGTTGCATATCGCAAGAATACAAATGCATCTCGTGGTTTTGGCTTTGTTACATACAAGACAGCAGAAGCTGCAAAGAAGGCAATTGATGATCCTCGGAAATTTCTTGGGAGAAAGATCCATAGCGGTCAAAATGCTTCTAGGAAACTTCCGGGGAGGTATATTATTGTAAAATATGCTTACTCCCACCAAGACCAACCACAATTTCCTGTGGGAGTGGTTCCAACCGCGGCCTTACCTATGGCCCCGGGATATGTACAGTCTAGAAATGCTCCCGTTCCTAATCCATCCCTTGGACATTTGTCTTACCCTCCAGCTTCTGGGAACAACTACCCACCTACGGGGATGAGCAACTCACTATCCTAA 933 0.4437 MRDSKKRKLNEAENVDLSSKEELLLLLDPLSKSQLVNLLVNLGARYPSVAEEIKRIASADLAHRKLFVRGLAFDTTSETLRAVSALLIAFQEHGEIVEATVIYDDATGESRGYGFIIYKHMESAQLALRAPVKLINGRMVAFNLAHENFRASSAPDLSLRKLFIGRLSDAVTTEMLLSFFGRHGQIEEGSVAYRKNTNASRGFGFVTYKTAEAAKKAIDDPRKFLGRKIHSGQNASRKLPGRYIIVKYAYSHQDQPQFPVGVVPTAALPMAPGYVQSRNAPVPNPSLGHLSYPPASGNNYPPTGMSNSLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g1500 310 SUPERFAMILY RNA-binding domain, RBD 63 151 IPR035979 GO:0003676
Enph4g1500 310 SMART rrm1_1 65 143 IPR000504 GO:0003723
Enph4g1500 310 SMART rrm1_1 161 232 IPR000504 GO:0003723
Enph4g1500 310 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 160 251 IPR000504 GO:0003723
Enph4g1500 310 SUPERFAMILY RNA-binding domain, RBD 148 230 IPR035979 GO:0003676
Enph4g1500 310 PANTHER GEO13361P1-RELATED 47 147 - -
Enph4g1500 310 Gene3D - 153 261 IPR012677 -
Enph4g1500 310 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 64 147 IPR000504 GO:0003723
Enph4g1500 310 Gene3D - 50 152 IPR012677 -
Enph4g1500 310 MobiDBLite consensus disorder prediction 279 310 - -
Enph4g1500 310 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 162 230 IPR000504 GO:0003723
Enph4g1500 310 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 137 IPR000504 GO:0003723
Enph4g1500 310 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g1500 Enph-Chr4 27778694 27781767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g1500 152 242 C2H2 Transcription Factor Family AT2G19380 35.165 4.31e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g1500 K12741 - gmx:100802911 315.079