Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g1396 ATGGAAGATGATGAATTCATCGACTCAACAGACCAATCTTCTCAAGGGTCTTTGTCCGAAAGATACCTGCTTGGCTTTGTCTGCGCCCGTATCGTTGGGGTTAAACACTATTCTGGCACCATCGCTGGTCGTGAAATGGTGGGTCTGGTCCGTGAACCTCTCAACCCATACGATGAGAACGCCATTAAGGTCCTTAACACTCGAGCAGTTCAGGTTGGACATATCGAGCGCTCCGTCGCTGCCGTACTGTCTCCTTTGTTAGACTCCAACCTAATCATTGTGGAAGGCATTGTGCCCAAAACGTCCTCTGCGTCCACGTTGTCAGAGTCTATGGCTATGAAAGATAAGCGGGTTAAAATAGAGCTTAAGAGCGTAGATGAGATTTTCAAGTTGGTTGATGAGAATGTCAGCAAAAGGTCTGCATTGGAAGCACTGGAGCCCCCTCGAAGTATCATTAAGTCTGGTCTTTTCCTACATCAGAAGGAAGGCTTGGGGTGGTTAGTTCATAGGGAGAATTCTGGTGAATTGCCGCCATTTTGGGAAGAGAAAGATGGAGCCTACGTGAATGTTTTGACCAATTATCATACAAACAGAAGGCCAGAGCCTTTGCGAGGTGGTATTTTAGCTGATGATATGGGATTAGGCAAGACCTTAACATTACTTTCTTTAATTGCTCTCGATAGAGATCCTAGTGCTCTAAATATGGAAGAAGGGAACCATGATGAAATGGAGGAGCAGAATGAAGGATTCCCTGTCTCCAGTGGTGAGAAGGGTCAGAAGAGAAGAACAAATGACAAGGCCACTGGATCAGAAGAAAGACGCAAGACTGAGAGTACTTCTTCGTGGGGCCATGCCAATGAAAAATCTATTCTCATAGATGGCACATCTTTATCTGGCATGGATATAAAGAAGGGCAAGAGGAGAAGAGCCAATGAACTGACCAAGGGATCAGAAAGAAGACGCAAGACTGAGAGTACTTCTTCATGGGGTCATGTTAATGAAAGATCTATTGTCGAAGATGACACATCTTTATACGATACTGATATAAAGACTACATTGGTTGTGTGCCCCGCTTCTGTATTTTCAACGTGGATAACACAGTTGGAAGAACATACTAAACCAGGCGCATTGAAGACGTACATGTATTATGGTGATAGAAGGACCGAGGATGCGGAAGAACTTAAGGTGTATGACTTAGTATTAACCACGTATACCACTTTAGCTGTTGAAGAATCTCGTATTGACTCACCCATAAATAAAGTAGAGTGGTGGAGGGTCATTTTGGACGAAGCGCATATAATCAAGAATGTCAACGCTAAACAAAGCCAAGCTATCATGAAACTCATGGCAAAGCGGAGGTGGGCAGTTACAGGGACACCAATTCAAAATGGTTTACATGATTTATTTTCTCTCATGGCATTTTTACGCTTTCAGCCATTTTCAATAAAGAGTTATTGGCAGAGCTTAGTGCAACTTCCTCTTGCTGAAAGAAACCCGAACGGACTCTTGCGTCTTCAGGTTTTGATGGCAACAATTTCTCTGAGAAGAACAAAAGATAAGGCATTGGTTGGATTGCCTCCAAAAACTGTGGAGACTTGTTATGTGGAACTTCTTGAGGAAGAACGGAAATTATATGATCAGATGGAATTGAGAGCAAAGAACATAGTGTCAAATGTTTCCAAGAACCCGGAGTTGCTGCAAAAGTTGGTTGAAATGCTGCAAGATGGTGAAGATTTTGACTGTCCAATATGTATATCTCCACCAACTGATGTTGTAATTACACGCTGTGCTCACATATTCTGCCTAGCCTGTATTCTTAAAACCCTGCAGCGCAGCAAAGCCTGTTGTCCTCTTTGCCGTCAGCCCCTCCAAGAATCTGACTTGTTCTCTGCCCCACCTCAATCTCCAGAGGCTGATGCTTCTGGACTCTCTTCACACAAGACAAGCTTATCCTCTAAGGTGTCTGCTCTGATAAAACTTCTTGTTGCCTCAAGAGATCGAAACCCAGCTGCAAAATCAGTCGTGTTTTCACAATTTCGTAAGATGCTAATTTTACTGGAACAGCCTCTGAAAGCAGCTGGTTTCAAGACACTGCGTCTTGACGGGACCATGAATGCTAAACAAAGGGCTCAAGTTATGGAGGAATTTGGAGCTGCAGGAACAGATGGACCCACGGTTCTGCTGGCAAGCCTCAGAGCTTCAGGAACAGGTATAAATCTTACGGCCGCCTCCACAGTGTACTTGCTGGAGCCATGGTGGAACCCAGGAGTGGAGGAACAAGCAATGGATCGGGTGCACCGCATTGGACAGAAAGAGGAGGTGAAGATTGTAAGACTGATTGCTAAAAACAGCATTGAAGAAAGGATATTGGAATTGCAAGGGAAGAAGAAGCAGCTGGCAAAGGAAGCATTTGAAAAGAGGCGAGCAAAGGATCGTAAAGAAGTCGGAGGGGAGGATTTCCGAATGCTCTTGTCCTTGTGA 2481 0.4446 MEDDEFIDSTDQSSQGSLSERYLLGFVCARIVGVKHYSGTIAGREMVGLVREPLNPYDENAIKVLNTRAVQVGHIERSVAAVLSPLLDSNLIIVEGIVPKTSSASTLSESMAMKDKRVKIELKSVDEIFKLVDENVSKRSALEALEPPRSIIKSGLFLHQKEGLGWLVHRENSGELPPFWEEKDGAYVNVLTNYHTNRRPEPLRGGILADDMGLGKTLTLLSLIALDRDPSALNMEEGNHDEMEEQNEGFPVSSGEKGQKRRTNDKATGSEERRKTESTSSWGHANEKSILIDGTSLSGMDIKKGKRRRANELTKGSERRRKTESTSSWGHVNERSIVEDDTSLYDTDIKTTLVVCPASVFSTWITQLEEHTKPGALKTYMYYGDRRTEDAEELKVYDLVLTTYTTLAVEESRIDSPINKVEWWRVILDEAHIIKNVNAKQSQAIMKLMAKRRWAVTGTPIQNGLHDLFSLMAFLRFQPFSIKSYWQSLVQLPLAERNPNGLLRLQVLMATISLRRTKDKALVGLPPKTVETCYVELLEEERKLYDQMELRAKNIVSNVSKNPELLQKLVEMLQDGEDFDCPICISPPTDVVITRCAHIFCLACILKTLQRSKACCPLCRQPLQESDLFSAPPQSPEADASGLSSHKTSLSSKVSALIKLLVASRDRNPAAKSVVFSQFRKMLILLEQPLKAAGFKTLRLDGTMNAKQRAQVMEEFGAAGTDGPTVLLASLRASGTGINLTAASTVYLLEPWWNPGVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEERILELQGKKKQLAKEAFEKRRAKDRKEVGGEDFRMLLSL 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g1396 826 SMART ring_2 581 619 IPR001841 -
Enph4g1396 826 Gene3D - 335 517 IPR038718 -
Enph4g1396 826 Gene3D - 636 821 IPR027417 -
Enph4g1396 826 SUPERFAMILY RING/U-box 564 626 - -
Enph4g1396 826 SMART HIRAN_2 24 122 IPR014905 GO:0003676|GO:0008270|GO:0016818
Enph4g1396 826 SMART helicmild6 684 769 IPR001650 -
Enph4g1396 826 ProSitePatterns Zinc finger RING-type signature. 596 605 IPR017907 -
Enph4g1396 826 CDD RING-HC_HLTF 576 628 - -
Enph4g1396 826 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 656 808 IPR001650 -
Enph4g1396 826 Pfam SNF2-related domain 159 572 IPR000330 GO:0005524|GO:0140658
Enph4g1396 826 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 104 823 - -
Enph4g1396 826 Pfam HIRAN domain 27 102 IPR014905 GO:0003676|GO:0008270|GO:0016818
Enph4g1396 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 806 IPR027417 -
Enph4g1396 826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 535 635 IPR013083 -
Enph4g1396 826 Coils Coil 782 802 - -
Enph4g1396 826 ProSiteProfiles Zinc finger RING-type profile. 581 620 IPR001841 -
Enph4g1396 826 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 350 478 IPR014001 -
Enph4g1396 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 498 IPR027417 -
Enph4g1396 826 Pfam Zinc finger, C3HC4 type (RING finger) 578 625 - -
Enph4g1396 826 SMART ultradead3 152 490 IPR014001 -
Enph4g1396 826 MobiDBLite consensus disorder prediction 240 330 - -
Enph4g1396 826 Coils Coil 538 558 - -
Enph4g1396 826 CDD SF2_C_SNF 650 780 - -
Enph4g1396 826 Pfam Helicase conserved C-terminal domain 653 769 IPR001650 -
Enph4g1396 826 Gene3D - 16 132 - -
Enph4g1396 826 MobiDBLite consensus disorder prediction 300 330 - -
Enph4g1396 826 Gene3D - 133 240 IPR038718 -
Enph4g1396 826 MobiDBLite consensus disorder prediction 258 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g1396 Enph-Chr4 26815948 26820683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g1396 332 826 RAD5 or RAD16-like Gene Family AT5G05130 62.546 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph4g1396 SNF2_N 7e-74 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g1396 K15711 - jre:108979720 995.727