Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g1072 ATGACGGACGGTCATCTCTTCAACAACATCGCACTTGGTGGCCGTGGAGGCGCTAATCCTGGGCAGATGAAAATATACTCTGGAGGTATTTTATGGAAAAGACAGGGGGGTGGCAAAGCAATCGAGGTTGATAAAGCTGACATAATGGGAGTGACTTGGATGAAGGTTCCAAGAACTAATCAGTTAGGCGTTCGAATCAAAGATGGATTGTATTACAAGTTCACTGGGTTCCGTGACCAGGATGTTGCAAGTTTGACTAGTTTTTTCCAAAACACATGTGGGATAACACCAGAGGAGAAACAGCTTTCTGTTAGTGGGCGTAATTGGGGAGAAGTTGATTTAAATGGAAATATGCTGACCTTCATGGTCGGCTCAAAGCAAGCTTTCGAGGTGTCTTTAGCAGATGTCTCTCAAACACAGCTTCAAGGGAAAAATGATGTGATCTTGGAGTTTCATGTGGATGACACAACTGGAGCCAATGAGAAAGATTCATTGATGGAGATAAGCTTTCACATACCAAATTCCAACACTCAATTTGTTGGTGATGAAAATCGTCCTCCTGCTCAGGTTTTCCGTGACAAAATCATGTCGATGGCAGATGTTGGTGCTGGAGGTGAAGATGCTGTTGTTACATTTGAGGGTATTGCTATTCTAACACCAAGGGGGCGATACAGTGTTGAGCTACATTTGTCATTCTTGCGGCTCCAAGGGCAGGCTAATGATTTCAAAATCCAGTACAGCAGTGTAGTTCGCCTATTTTTACTTCCTAAGTCGAACCAGCCGCATACATTTGTTGTTATTAGTCTTGATCCTCCTATTCGCAAAGGACAAACTTTGTACCCACACATTGTGATGCAGTTTGAGACTGACTTTGTAGTTCAAAGCTCCTTGTCAATGAGTGAAGATCTTTTCAACAGCAAATACAAGGACAAGTTGGAGCTTTCGTATAAGGGGCTCATCCATGAAGTTTTCACAACAATATTGCGTGGATTGTCTGGTGCCAAAGTTACCAAGCCAGGAAAATTCAGGAGCTGTCAAGATGGTTATGCAGTGAAATCTTCTTTGAAAGCTGAAGATGGAATTTTGTATCCCCTTGAGAAGAGCTTCTTCTTCCTACCAAAACCTCCTACCCTCATTCTTCATGAAGAGATTGATTATGTAGAATTTGAAAGGCATACTGCTGGTGGTTCAAATATGCATTATTTTGACCTTCTTATTAGACTAAAAACTGAGCAAGAGCATCTATTCCGTAACATTCAGAGAAATGAATACCACAATCTGTTTGACTTTATCAGTGGGATAGGTAGGGCTTGGGTTCTTTTGGTACTGGATGAGGACTTTGTTGCTGATGAGGATGATGGTGGCTCTCCAACTGATGATTCTGGAGAAGACAATTCAGATGCAAGTGAAAGTGGTGGTGGGAAAGAGAATCTGAAGAAAAGTAATCCTGGAATTTCATTTACGGATGTGGGAAGAGTACTTGGAGAGAAATGGAAAAAGATGTCAGCGGAAGAGAAGGAACCATATGAAGCAAAAGCTCGTGCAGATAAAAAACGTTACAAGGATGAGATCAGTGGGTACAAGAATCCGCAACCTATGAACGTAGACTCAGGAAATGAATCTGACAGCACCTGA 1635 0.4208 MTDGHLFNNIALGGRGGANPGQMKIYSGGILWKRQGGGKAIEVDKADIMGVTWMKVPRTNQLGVRIKDGLYYKFTGFRDQDVASLTSFFQNTCGITPEEKQLSVSGRNWGEVDLNGNMLTFMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDFVVQSSLSMSEDLFNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGIGRAWVLLVLDEDFVADEDDGGSPTDDSGEDNSDASESGGGKENLKKSNPGISFTDVGRVLGEKWKKMSAEEKEPYEAKARADKKRYKDEISGYKNPQPMNVDSGNESDST 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g1072 544 SMART hmgende2 473 529 IPR009071 -
Enph4g1072 544 FunFam Fact complex subunit ssrp1 199 338 - -
Enph4g1072 544 Pfam Structure-specific recognition protein (SSRP1) 106 174 IPR024954 -
Enph4g1072 544 Pfam Histone chaperone Rttp106-like 350 432 IPR013719 -
Enph4g1072 544 MobiDBLite consensus disorder prediction 501 525 - -
Enph4g1072 544 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 475 528 IPR009071 -
Enph4g1072 544 SMART Rtt106_2 348 435 IPR013719 -
Enph4g1072 544 MobiDBLite consensus disorder prediction 451 466 - -
Enph4g1072 544 Pfam POB3-like N-terminal PH domain 7 98 IPR035417 -
Enph4g1072 544 SUPERFAMILY HMG-box 477 531 IPR036910 -
Enph4g1072 544 CDD PH2_SSRP1-like 342 433 - -
Enph4g1072 544 Gene3D - 1 92 IPR011993 -
Enph4g1072 544 Gene3D High mobility group box domain 474 538 IPR036910 -
Enph4g1072 544 FunFam FACT complex subunit SSRP1 1 93 - -
Enph4g1072 544 FunFam FACT complex subunit SSRP1 339 436 - -
Enph4g1072 544 Gene3D - 199 338 - -
Enph4g1072 544 Gene3D - 339 437 IPR011993 -
Enph4g1072 544 PANTHER FACT COMPLEX SUBUNIT SSRP1 1 433 - -
Enph4g1072 544 SUPERFAMILY PH domain-like 206 434 - -
Enph4g1072 544 MobiDBLite consensus disorder prediction 451 488 - -
Enph4g1072 544 MobiDBLite consensus disorder prediction 501 544 - -
Enph4g1072 544 Gene3D - 96 179 IPR038167 -
Enph4g1072 544 MobiDBLite consensus disorder prediction 530 544 - -
Enph4g1072 544 FunFam FACT complex subunit SSRP1 96 179 - -
Enph4g1072 544 Pfam HMG (high mobility group) box 475 528 IPR009071 -
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 329 342 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 416 434 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 219 235 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 400 416 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 241 257 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 374 391 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 264 280 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 PRINTS Structure-specific recognition protein signature 356 374 IPR000969 GO:0003677|GO:0005634
Enph4g1072 544 CDD PH1_SSRP1-like 207 340 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Enph4g1072 POB3_N 3.5e-22 CL0266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g1072 K09272 - rcu:8276028 920.613