Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0886 ATGAAGCAGTCTTTTGACCTTGCGGCTTCTGGTCCAACCAAGGTTCCATCTATAAATATACCTAAAAAACTGGGATGCAATGCTTGGGAGGTTTTATCTGGATCTGATGCCTATCATACCTCATCGGATGCTAGCCTCTTTTCTAGCTCATTACCTGTTTTGCCACATGAAAAGTTGAACTTAAATGACACTGAAAATGAGTATCAATCTGTGGATGACATCTCATCTGGCTTTAAAAAGATCCAACAAGATTTAGAGGTTAATGAATCACTTGAGGATGCTGATATTCATGCAATTGGAACAATGCTTCCTGATGATGAGGAGGAGCTTTTAGCTGGCATAGCGGATGATTTTGACCTTAGTGGATTGCCTGGTTCCCTGGAGGACTTGGAAGATTATGATCTTTTCGGCAGTGGTGGAGGTATGGAGCTGGAAACTGATCCACAGGAAAGTCTTAGTGTGGGCATGTCAAAATTAAGCTTCTCTGACAGTACAATTGGCAATGGTTTGCCCCACTATTCTTTTCCTAATGGTGTTGGATCTGTTGCTGGGGAACATCCATATGGGGAGCATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAACGTGGAGGATTCAGAGTTGAGAGTCCTTTTTGAGCAATATGGTGATATTAGAACCCTCTATACTGCATGCAAACATCGGGGGTTTGTTATGATATCCTACTATGACATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGGCGGAGGAAACTTGATATTCACTTCTCTATACCAAAGGATAATCCATCAGACAAGGATATAAATCAAGGAACTTTGGTGGTTTTCAATTTGGATCCATCTGTTTCAAATGAAGACCTTCATCAAATATTTGGAGCTTATGGCGAGGTCAAAGAGATTAGGGAAACTCCTCACAAGAGGCATCATAAATTTATTGAATTTTATGATGTTAGAGCTGCAGAAGCAGCACTTAAATCATTGAACAGGAGTGACATAGCGGGTAAACGGATAAAGCTGGAACCTAGCCGTCCTGGTGGAGCTCGTCGAAAGTGTGTGCAGTTGCCTGGTTGGGATCTGATGCAGGTTAGGGTTAGGCTGTGGTATGGGTTTGGATTATGGTTGATGTCCTATGGCTATCTTGTTGGTTTGATGCTCCAACTTAATCAAGATCTTGATCAAGATGAATCTCGGAATTTCAGACATCAAGTGGGTTCACCTGTAGCCAACTCTCCACCAGGTAACTGGTTGCAGTTTAACAGCCCCATTGAACTTAAGCCAATACAATCTATCAGTAACTCTCCTGGCTCTAGGATTATGAGCCCAACAACTGGCAATCATTTACCAGGATTAGCTTCAATCTTGCAACCTCAGGTATCTAATCCTGTAAAGGGGGCAGCAATTGGTAAGGACATAGGAAGGAGTAGTCATGGAGATCACATGTTTAGTAGTACCAATTCATCACATGGAGCTATATTCCAATCACATTCACTTCCAGAACCAACCTTTGGCCAATATCATGGAGCTTTGTCCTCTTTTGGTCCATCAACTTCAAATGGATCTTCTGTGGAAACCTTGTCTGGGCCACAGTTTCTTTGGGGAAATTCAAGCTTATACTCTGAGCACACCAAAACTTCACCTTGGCCTAGACCATCTGTAGCACTTCCATTTACATCGAATGGGAAAGGCCATGGCTTTGCATACTCTGGACACAATGATGGAAACTACATGGTTAATATGGGTGGATCTGTTAATGCTGGCATTACTATACCAAGGAATTTGTCTGAAAATGTTCAATCAAACTTTAGAATGAGATCTTCTCCTAGGCTTAGCCCTGTGTTTCTGGGTAATGGTCCTTACTCGGGCCTGCCTCCCACTGCTCTGGAGTGTTTGACTGACCGTGGTAGGAGTAGACGACTAGAGAACAATGGCAACCAAGTTGATAGTAAGAAGCAATTTCTGCTTGACTTGGATAAGATTAAAAGTGGTGAAGATGCAAGGACTACTTTAATGATAAAGAACATCCCAAATAAGTATACTTCAAAAATGTTACTAGCTGCCATTGATGAAAATCACAAGGGCACCTATGATTTCCTCTATCTGCCTATTGATTTTAAGAATAAGTGCAATGTGGGCTATGCATTTATCAACATGTTGTCACCCTCTCTTATCATTCCATTCTATGAGACATTCAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCATATGCTCGAATCCAAGGAAAGGCTGCTCTTGTGAGCCACTTCCAAAATTCAAGTTTGATGAATGAAGACAAGCGATGTCGCCCTATTCTCTTCCACTCAGAGGGTCCTGAAGCTGGTGATCAGATTGCACAGGAACATCTTCCCTCCAATAATCTAAATATCCAGGTCCTCAGGTCAAGTGATTCGCTCTTGATTGACTCTCCTGGAAGCCCCCCTAAGGATAACCTTCCTTTGAACTTGGAGACAAATTAG 2517 0.4207 MKQSFDLAASGPTKVPSINIPKKLGCNAWEVLSGSDAYHTSSDASLFSSSLPVLPHEKLNLNDTENEYQSVDDISSGFKKIQQDLEVNESLEDADIHAIGTMLPDDEEELLAGIADDFDLSGLPGSLEDLEDYDLFGSGGGMELETDPQESLSVGMSKLSFSDSTIGNGLPHYSFPNGVGSVAGEHPYGEHPSRTLFVRNINSNVEDSELRVLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLHQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRKCVQLPGWDLMQVRVRLWYGFGLWLMSYGYLVGLMLQLNQDLDQDESRNFRHQVGSPVANSPPGNWLQFNSPIELKPIQSISNSPGSRIMSPTTGNHLPGLASILQPQVSNPVKGAAIGKDIGRSSHGDHMFSSTNSSHGAIFQSHSLPEPTFGQYHGALSSFGPSTSNGSSVETLSGPQFLWGNSSLYSEHTKTSPWPRPSVALPFTSNGKGHGFAYSGHNDGNYMVNMGGSVNAGITIPRNLSENVQSNFRMRSSPRLSPVFLGNGPYSGLPPTALECLTDRGRSRRLENNGNQVDSKKQFLLDLDKIKSGEDARTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFNGKKWEKFNSEKVASLAYARIQGKAALVSHFQNSSLMNEDKRCRPILFHSEGPEAGDQIAQEHLPSNNLNIQVLRSSDSLLIDSPGSPPKDNLPLNLETN 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0886 838 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 196 260 IPR000504 GO:0003723
Enph4g0886 838 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 281 346 IPR000504 GO:0003723
Enph4g0886 838 FunFam Protein MEI2-like 1 278 372 - -
Enph4g0886 838 FunFam MEI2-like protein 5 isoform 2 183 277 - -
Enph4g0886 838 Gene3D - 278 358 IPR012677 -
Enph4g0886 838 CDD RRM3_MEI2_like 677 762 IPR034454 -
Enph4g0886 838 CDD RRM2_MEI2_like 278 348 - -
Enph4g0886 838 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 194 267 IPR000504 GO:0003723
Enph4g0886 838 Gene3D - 183 277 IPR012677 -
Enph4g0886 838 Pfam RNA recognition motif 2 674 770 IPR007201 -
Enph4g0886 838 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 279 352 IPR000504 GO:0003723
Enph4g0886 838 CDD RRM1_MEI2_like 193 269 IPR034453 -
Enph4g0886 838 SMART rrm1_1 280 348 IPR000504 GO:0003723
Enph4g0886 838 SMART rrm1_1 195 263 IPR000504 GO:0003723
Enph4g0886 838 SMART rrm1_1 676 752 IPR000504 GO:0003723
Enph4g0886 838 PANTHER RNA RECOGNITION MOTIF-CONTAINING 44 809 - -
Enph4g0886 838 SUPERFAMILY RNA-binding domain, RBD 191 353 IPR035979 GO:0003676
Enph4g0886 838 SUPERFAMILY RNA-binding domain, RBD 676 761 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0886 Enph-Chr4 22458279 22467859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0886 189 358 Eukaryotic Initiation Factors Gene Family AT1G71770 25.773 5.36e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0886 - - gmx:100787152 1296.18