LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0827	ATGTCTGCCTCAGTCAATGGGAATGAATCACTCACTGGTCACATTATATCTACAACAATTGGAGGCGAAAATGGGGAACCCAAACAGACTATTAGTTACATGGCAGAACGTGTTGTGGGAACTGGATCATTTGGGACTGTTTTCCAGGCGAAATGCTTAGAAACTGGTGAGGCAGTGGCAATTAAGAAGGTTTTACAAGACAGAAGATATAAAAATCGTGAATTACAGTTAATGCGTGTGATGAACCATCCAAATGTGATCTCCCTGAAGCATTGTTTCTTTTCCACTACAAGTACAAACGAGCAATTTCTTAATTTGGTGATGGAATATGTTCCAAAAAGCATGTATCAGGTCATTATGCATTATACAAATTCTAATCAGAGAATGCCACTTATTTATGTAAAGCTTTACATGTACCAGATTTTCAGGGGTTTGGCTTATATCCACACTGTTCCAGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTTGATCCTCTAACACATCAAGTTAAGCTATGTGATTTCGGAAGTGCCAAAGTGCTAGTCAAAGGTGAAGCTAACATATCATACATATGTTCACGCTTCTATCGAGCTCCAGAACTCATATTTGGTGCCACAGAGTATACATCCTCAATTGACATTTGGTCAGCTGGCTGTGTCTTGGCTGAGCTTCTTTCAGGCCAGGTTCTTGGCACACCCACTCGAGAGGAAGTTCGTTGTATGAATCCCAATTACAATGACTTTAGGTTTCCCCAGGTTAAAGCACGCCCATGGCATAAGATATTCCACAAAAGGATGCCTCCAGAAGCTATTGATCTTGCTTCTCGGCTTCTGCAATACTCCCCAAGTCTTCGGTGCACTGCGCTAGAAGCATGTGCACATCCTTTCTTTGATGAACTTAGAGAACCCAATGCACGCCTACCAAATGGTCGTCCATTTCCAGCATTATTCAACTTTGGACAAGAACTATCTGGAGTGTCTCCAGATCTTGTTAACAAGTTAATACCAGATCACGTGAAGCGGCAAATGGGGCTACAGTTTATCCATCTGACCGGAACATGA	1071	0.4192	MSASVNGNESLTGHIISTTIGGENGEPKQTISYMAERVVGTGSFGTVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMNHPNVISLKHCFFSTTSTNEQFLNLVMEYVPKSMYQVIMHYTNSNQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLSGQVLGTPTREEVRCMNPNYNDFRFPQVKARPWHKIFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPALFNFGQELSGVSPDLVNKLIPDHVKRQMGLQFIHLTGT	356

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph4g0827	356	Gene3D	Phosphorylase Kinase; domain 1	18	112	-	-
	Enph4g0827	356	FunFam	Glycogen synthase kinase-3 beta	17	112	-	-
	Enph4g0827	356	CDD	STKc_GSK3	28	303	IPR039192	-
	Enph4g0827	356	PANTHER	GLYCOGEN SYNTHASE KINASE-3 ALPHA	4	345	-	-
	Enph4g0827	356	Pfam	Protein kinase domain	33	300	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph4g0827	356	ProSiteProfiles	Protein kinase domain profile.	33	300	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph4g0827	356	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	154	166	IPR008271	GO:0004672\|GO:0006468
	Enph4g0827	356	ProSitePatterns	Protein kinases ATP-binding region signature.	39	63	IPR017441	GO:0005524
	Enph4g0827	356	SMART	serkin_6	33	300	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph4g0827	356	FunFam	Mitogen-activated protein kinase	113	317	-	-
	Enph4g0827	356	SUPERFAMILY	Protein kinase-like (PK-like)	32	323	IPR011009	-
	Enph4g0827	356	Gene3D	Transferase(Phosphotransferase) domain 1	113	343	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0827	Enph-Chr4	21943882	21949184	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0827	39	338	MAP Kinase Gene Family	AT2G43790	32.219	1.64e-46	161

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_GSK	Enph4g0827		Pkinase	3.8e-62	CL0016