LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0817	ATGTCACCAGATCAAGGATACGAGATTGAAGACGAGAAGAATAGCAGGTGTAGTGAGGACAATTCATTGGGATCTTCTCAGATATGCTCGTCCTTTGACTTGAATGAAGAAGCGAACCCAGAAGACGAGAATGAAGTAGACGTCTGTGATGAGATCATAGAAGATGAAGATGACGAGAAAGCAAAGGACGAAGGTACTTCAGCTAACAGAAGCACATCGATCGAAGGAAATGAAAGAAGAAGAACAGTGAGACAGTATGTGAGATCAAAGATGCCTCGGCTTCGATGGACTCCTGAACTTCATCTCTCCTTTCTTCAAGCTGTTGAAAGGCTTGGAGGCCAAGAGAGAGCTACGCCCAAGTTGGTGCTCCAGCAAATGAATGTGAGAGGTCTTAGCATTGCTCACGTGAAGAGTCACCTGCAGATGTACCGAAGTAAGAAACTTGATGAGGCCGGGCAAGTTGAAAGGCAAGCAGTATTCACTTTGAAACTTCCAGTAAAGAATGTAGGAAATTTCATATCGCTCAACTCTGATGAATTTACTGTACTGTGCACAGCAGTTCTTGGTCAAACATTCAGATCGATCCAGAAAGAAGGTCTTATTTCTCAGACACCACATCAGTCTGTGAACCCTCGTCAATATTTTAAGATGGGAAATGGTGGAATCATCCTAGCAAGTGAGGGCAACGAGCATAGTAGTCTCGTTCAAGGTCTTTTTAAGTCCTCCTTCTCCCTATCACGTTCACATACAAAGCCTGCCAATTCACGGCAGCAACTCTGGTACCTGAACCATCAACCTATCAGAAGACCAAGTTTCAATGCAGGCAACGAAGAGATGATGGATTCAAACTGCAAAATAGCACCCATGAGACGTAACCAAGCTCTGGAAGAGAAAAGGTGGCCTCCGCCGGAAATGATAAACACTCATCAATGGAAGTTCAAAAGGTTACAAACCAATTACACAGCTTGGGTTAATGCTGGCTCAGAACCAGATCTGCATCATTCAAACTTCAACGAGTACTCTAGCAACCATTGCAATAGTCTGAAGCTAGATTTTGAGCCCCCGTTTAGGATTGAGGTGAATCAAGCAATGCTGGGGCAAGAGAAGCAGTGGTTGCCTGATTTGCAGCTGGGGTTGAGTCTGGGAGATTGCAATGAGACCCAAGAAATTAGCACCAAGCTTTCACTTTCTTAG	1194	0.4439	MSPDQGYEIEDEKNSRCSEDNSLGSSQICSSFDLNEEANPEDENEVDVCDEIIEDEDDEKAKDEGTSANRSTSIEGNERRRTVRQYVRSKMPRLRWTPELHLSFLQAVERLGGQERATPKLVLQQMNVRGLSIAHVKSHLQMYRSKKLDEAGQVERQAVFTLKLPVKNVGNFISLNSDEFTVLCTAVLGQTFRSIQKEGLISQTPHQSVNPRQYFKMGNGGIILASEGNEHSSLVQGLFKSSFSLSRSHTKPANSRQQLWYLNHQPIRRPSFNAGNEEMMDSNCKIAPMRRNQALEEKRWPPPEMINTHQWKFKRLQTNYTAWVNAGSEPDLHHSNFNEYSSNHCNSLKLDFEPPFRIEVNQAMLGQEKQWLPDLQLGLSLGDCNETQEISTKLSLS	397

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Enph4g0817	397	SUPERFAMILY	Homeodomain-like	90	146	IPR009057	-
Enph4g0817	397	FunFam	Myb family transcription factor	90	148	-	-
Enph4g0817	397	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	92	147	IPR006447	GO:0003677
Enph4g0817	397	MobiDBLite	consensus disorder prediction	19	34	-	-
Enph4g0817	397	Gene3D	-	91	148	-	-
Enph4g0817	397	Pfam	Myb-like DNA-binding domain	94	144	IPR001005	-
Enph4g0817	397	MobiDBLite	consensus disorder prediction	1	18	-	-
Enph4g0817	397	MobiDBLite	consensus disorder prediction	1	82	-	-
Enph4g0817	397	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	88	148	IPR017930	-
Enph4g0817	397	MobiDBLite	consensus disorder prediction	36	61	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0817	Enph-Chr4	21835931	21837954	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0817	83	153	G2-like Transcription Factor Family	AT2G42660	76.056	9.87e-33	122

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Enph4g0817		Myb_DNA-binding	6.5e-08	CL0123

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph4g0817	-		-	pcin:129307103	375.941

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph4g0817	4	21835931	21837954	Enph4g0817	4	21835931	21837954	ECH

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