Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0663 ATGGCGGACGACGGGTTCGATTACTCGGAACTGGTTGATGGAGATGCTGATGCTGATGCTGATGATAAGTTGTTTATAGATCTTGACACCGTTATGAGTGTTCTTGATGAGGATTGTGATCCGTCGGAGAGTAGTCCAGAGGGTTTTTCAGTAAAAAATGTCTCACCAGGCGAATCCAGTATCCATGACAATTTTCAGCTTCAAAGTGGAAATCATGTGCTTTACTGTGATCATGAAAATCGAGGACCTCCATCACAGACTTGCTCTTCCTCACATGTTGTCCCTGACAATTTTCGGCAGTTGGATACTCTGGATGGAAGTAATGAAATCTGCTACATGGAAAGGAAAGGGACTTCAGGATGTGAGATGCCAGCCCAATCTTTGAAACTTAGTGTCTCTAAGACAGATTTCAACAATATATCAGTTTATGGGAATAATTTGAATTTGAATTCACTTGGGAAGGAAACAAATGAGAGCCAATTCAAGCATGTGGGAGAGGATGTTAATCCTATCATTGAGAATGGTGATGCAAATTTTGCACAATATAGAGCTTTTGATGAAGATATATGTGAAGGAGTTTCTGGGCAACAGGAAACTGACTCTTGTACATCTTTTGAAATATCATTTATGGATGCTAATGGAGGTTCTCATATTGCAACGTCAACCAATTCTACTATTTGCCAAGGTTCCAATGTGGTTCATGATTATCGTGACTACTTTCCATCCTTGCATGGTTATAAGGGTACAGATGATAGACTGTTAGCTTCTGACTTGTCTCTTGCTTATTTCCCTAATGTTTTTGGCTCTCAATTTTGGCCAAATCAAGAAATATTGGATAGTGGGAAGGGTGAAAATGTGGAATATTTAGCTGATACCTCACGTGTGAGTAGTAACATGCATTCCAGTTCTACTGGTGGGATTACTTTTCAAGACAATCAATTTATGTCTTCAGATAGTGAATTTTCTTCATTTTTTCCTGGTAATGCTTCATACTTGCCTAGTGAAGACCAAGTAATTTGTGTCAAAGGTGAAAGAGGTCAACTGATTGCACCTTACCAGAACTCTCTTTACGAAGATTATTCTGAGTTTAATATAGGCCAAGAGATCACTCAATTAAATGTGGGCCAAGAGATGAATCAATTACATTGTGCTTTTCCTTCCGCTGGATGTCATAGTTTTAATTCATTGAAGTGTGAGGATAAAGGTTCTGATATATTATCCAATATGAATCATCATTATCAAGGAATGATTGATGGTAAATTTCCAGGGGAAGTAGCTAGTTTGAATATACAAGCCTTAGACGAATCTCTGCCCTATGTACAGGCATCGATAGCTAGTGAGAAGAAGTTTTGTTATGTTAAGAGTGAAGGAGAGGGAAAAATGATTCAATGTAGGAATTTTGATGATCATAGATCAAGAGCAAGCACTGAATTGGTTCGGAGGGATTTTATAGAGAAATCTCATGTTGAGAATGATGACCCTGATGTCTGCATTATTGAAAGCATCAGTCATCCTGCACCAACAAATCGATCAACAGACCCTGGCACCTCTCATAGTATATCAAAGTATTCTGCGTATGGTGAGTCACAACCTTTCATGTCACGGGGCACAAGGATGAAGGCCAGTGATGAGCAATTTATGCCTCCTGATGGATTGATGGCTGTTCCTCTTTTAAGACATCAGAGAATTGCTTTGTCATGGATGGTTCAAAAGGAAACATCAAGCTTATACTGCTCAGGGGGGATCCTTGCAGATGATCAGGGACTTGGCAAAACAGTGTCGACTATTGCTTTGATACTGAAAGAAAGGCCTCCAGCACTAATAGATTGCCACAGTGCACAAAAAGAGGAATCAGAAACTTTGAATCTGGATGTGGATGATGATGTTCTTGCTGAGAGTGGTGGAGTGAAGAAAGATACATCAAGTATTTGCCCAGTCGAAAACAAGAATTTTATGCTAACAAAGGGAAGGCCATCTGCTGGAACACTTATAGTTTGTCCCACTAGTGTCCTGCGGCAATGGGCTGAAGAGTTGCAAAATAAGGTAACCAGCAAAGCTAATCTCTCTGTGCTAGTGTACCATGGAGGCAATCGAACCAAAGATCCTTATGTGCTGGCCAAGTATGATGTTGTTCTGACAACTTATTCAATTGTCAGCATGGAGGTACCTAAGCAGCCTCTGGTTGATAAAGATGATGAAGAGAAAGGAAATTCTGAAGTTCATGCTGGTCTATTGCCTAGCAAGAAAAGGAAGTGTCCTCCTTCTAGTAAAAGTGGCAAGAAGGGATTAGACCGTGGATTGCTTGAGTTTTCTGCTCGCCCTCTAGCAAAGGTGGCATGGTTTAGGGTTGTCTTGGATGAGGCCCAAAGTATAAAGAATTACAGAACTCAGGTTGCAAGGGCCTGTTGGGGTCTTCGTGCGAAGCGTAGATGGTGCTTGTCTGGGACTCCTATCCAGAATGCTATTGATGATCTTTACAGTTATTTCAGATTTCTCAGATATGACCCTTATGCTGTCTATAATACATTCTGCTCTACTATTAAGATTCCTATAAACAGAAGTCCAAACAAAGGATATAGAAAGCTACAAGCTGTCTTAAAGACAATAATGTTACGTCGTACTAAAGGCACACTTCTTGATGGGGAACCTATTATTACATTGCCGCCTAAACATATAAAGCTGAAAAAAGTGGATTTTTCAAGAGAGGAGAGAGATTTCTATTCCAGACTGGAGGCTGATTCTCGTGCACAGTTTCAGGAATATGCTAATGCTGGAACTGTCAAGGAAAATTATGTCAACATTCTCTTAATGCTTCTACGTCTTCGACAAGCATGTGATCATCCTCTGCTTGTTAAGCGCTACAATTCTAACTCTCTATGGAGATCTTCAGTTGAGATGGCAAAGAAACTTCCTTGGGAAAAACGAACATCTCTTCTAAAATGTTTGGAGGCTTCCTTGGCTCTTTGTGGCATCTGTAATGACCCTCCTGAAGATGCTGTTGTCTCATCTTGTGGTCATGTTTTTTGTAATCAGTGTATTTGTGAACATCTTACTGGTGATGACAATTATTGCCCTGCTACAAATTGCAAAGCTCAATTGAGCATGTCTTCTGTGTTTTCCAGAGCCACGTTGAGCTGTTCTCTTTCTGACCAGGCTAGTGATAGTTTGCTTGGTGGCTCTGGTTCTGAGGTGGAGGGTTATGAGCCTTGTTCACAGAGTCAGCCGTGCGATTCTTCAAAAATTAAGGCTGCTCTTGAGGTGTTGAACTCATTGTGTAAACCCCAGGGTAATGCAACAAAAAATATTTTGATGCAGATTAATACTGATGAACACATGGACTGCCTTGGGAACTTACCTGATGCCAACAAGGTGAAATCACTTAAGGATTCTCCTGAGAGTCAAAAAGTTTCAGATGGAAGTTCTAATGATTCAATTGTTAGAGAGAAAGCTATAGTGTTTTCTCAGTGGACAAGGATGTTGGATTTGCTTGAAGCATGTCTTAAGAATTCCTCGATTCAGTATAGGAGGCTTGATGGCACAATGTCAGTTGTTGCAAGAGATAAAGCTGTTAAAGATTTTAATACTCTCCCAGAGGTAACAGTTATGATTATGTCTTTGAAAGCTGCCAGCCTTGGTCTCAACATGGTAGCTGCCTGCCATGTGCTTTTGCTTGATCTATGGTGGAATCCTACAACTGAAGATCAAGCAATTGACAGAGCGCATCGAATTGGGCAGACTCGCCCTGTAACTGTTTTACGGTTGACTGTGAGAGATACGGTTGAAGATCGTATTTTAGCTTTACAGCAAAAGAAGCGAAAGATGGTTGCATCTGCATTTGGAGAAGATGAAACTGGCGGTCGTCAAAGTCGCCTCACAGTGGATGATTTAAAATACCTGTTCATGATGTTTGGAAACGTGGTAAAAGTGTTTCCTGAAGAAACTGCCCATGATATTATGTATGTTCCAAGAGTTTGA 3975 0.4058 MADDGFDYSELVDGDADADADDKLFIDLDTVMSVLDEDCDPSESSPEGFSVKNVSPGESSIHDNFQLQSGNHVLYCDHENRGPPSQTCSSSHVVPDNFRQLDTLDGSNEICYMERKGTSGCEMPAQSLKLSVSKTDFNNISVYGNNLNLNSLGKETNESQFKHVGEDVNPIIENGDANFAQYRAFDEDICEGVSGQQETDSCTSFEISFMDANGGSHIATSTNSTICQGSNVVHDYRDYFPSLHGYKGTDDRLLASDLSLAYFPNVFGSQFWPNQEILDSGKGENVEYLADTSRVSSNMHSSSTGGITFQDNQFMSSDSEFSSFFPGNASYLPSEDQVICVKGERGQLIAPYQNSLYEDYSEFNIGQEITQLNVGQEMNQLHCAFPSAGCHSFNSLKCEDKGSDILSNMNHHYQGMIDGKFPGEVASLNIQALDESLPYVQASIASEKKFCYVKSEGEGKMIQCRNFDDHRSRASTELVRRDFIEKSHVENDDPDVCIIESISHPAPTNRSTDPGTSHSISKYSAYGESQPFMSRGTRMKASDEQFMPPDGLMAVPLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIALILKERPPALIDCHSAQKEESETLNLDVDDDVLAESGGVKKDTSSICPVENKNFMLTKGRPSAGTLIVCPTSVLRQWAEELQNKVTSKANLSVLVYHGGNRTKDPYVLAKYDVVLTTYSIVSMEVPKQPLVDKDDEEKGNSEVHAGLLPSKKRKCPPSSKSGKKGLDRGLLEFSARPLAKVAWFRVVLDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYNTFCSTIKIPINRSPNKGYRKLQAVLKTIMLRRTKGTLLDGEPIITLPPKHIKLKKVDFSREERDFYSRLEADSRAQFQEYANAGTVKENYVNILLMLLRLRQACDHPLLVKRYNSNSLWRSSVEMAKKLPWEKRTSLLKCLEASLALCGICNDPPEDAVVSSCGHVFCNQCICEHLTGDDNYCPATNCKAQLSMSSVFSRATLSCSLSDQASDSLLGGSGSEVEGYEPCSQSQPCDSSKIKAALEVLNSLCKPQGNATKNILMQINTDEHMDCLGNLPDANKVKSLKDSPESQKVSDGSSNDSIVREKAIVFSQWTRMLDLLEACLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVTVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKRKMVASAFGEDETGGRQSRLTVDDLKYLFMMFGNVVKVFPEETAHDIMYVPRV 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0663 1324 ProSiteProfiles Zinc finger RING-type profile. 989 1028 IPR001841 -
Enph4g0663 1324 Gene3D - 530 731 IPR038718 -
Enph4g0663 1324 Gene3D - 1073 1299 IPR027417 -
Enph4g0663 1324 Gene3D - 764 886 IPR038718 -
Enph4g0663 1324 SMART ring_2 989 1027 IPR001841 -
Enph4g0663 1324 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 619 835 IPR014001 -
Enph4g0663 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1302 IPR027417 -
Enph4g0663 1324 CDD DEXDc_SHPRH-like 557 873 - -
Enph4g0663 1324 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 755 885 - -
Enph4g0663 1324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 982 1040 IPR013083 -
Enph4g0663 1324 Pfam Zinc finger, C3HC4 type (RING finger) 989 1025 IPR018957 GO:0046872
Enph4g0663 1324 MobiDBLite consensus disorder prediction 728 762 - -
Enph4g0663 1324 SMART ultradead3 553 850 IPR014001 -
Enph4g0663 1324 ProSitePatterns Zinc finger RING-type signature. 1004 1013 IPR017907 -
Enph4g0663 1324 Pfam SNF2-related domain 577 950 IPR000330 GO:0005524|GO:0140658
Enph4g0663 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 873 IPR027417 -
Enph4g0663 1324 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1140 1297 IPR001650 -
Enph4g0663 1324 Pfam Helicase conserved C-terminal domain 1146 1244 IPR001650 -
Enph4g0663 1324 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 455 1301 - -
Enph4g0663 1324 SMART helicmild6 1161 1244 IPR001650 -
Enph4g0663 1324 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 644 731 - -
Enph4g0663 1324 SUPERFAMILY RING/U-box 986 1033 - -
Enph4g0663 1324 CDD SF2_C_SNF 1147 1254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0663 Enph-Chr4 20460129 20470939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0663 456 1301 RAD5 or RAD16-like Gene Family AT1G61140 59.909 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph4g0663 SNF2_N 8e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0663 - - lang:109332935 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph4g0663 4 20460129 20470939 Enph4g0663 4 20460129 20470939 CCT