Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0543 ATGTCTGAGCTCGAAGCTTCTCGCTCCGACAAGAAGAAGAAGAAGCACCGAAACAAAGACGAAACCCCTGACCTTCAAGATTCTGACTTCCTCATCAAACCCCAGAGCTTCACTCCCTCCATTGACACTTCTCAATGGCCGATTCTCCTCAAGAACTACGACCGCCTCAATGTGCGAACCGGACACTACACTCCAATTCCCTCCGGTTTCTCCCCTCTCAAGCGCCCTCTTGCCGAGTACATCAAGTATGGTGTGATGAATCTCGATAAACCAGCAAACCCCTCTTCCCATGAGGTCGTCGCTTGGATTAAACGTATCCTTCGGGTCGAGAAAACGGGTCACAGTGGTACTCTTGATCCCAAGGTCACCGGCAACCTCATAGTTTGCATCGATAGAGCCACGCGTTTGGTGAAATCGCAACAGGGAGCTGGGAAAGAGTACGTCTGTGTTGCTCGATTACACTCTGCAGTGCCTGATGTCGGCAAAGTGGCTCGTGCACTTGAGACGCTTACTGGAGCTGTGTTCCAGCGGCCTCCATTGATTTCTGCCGTGAAGAGGCAGCTTAGGATCAGAACAATATATGAAAGTAAGCTTCTTGAGTATGATCCTGATAAGCATTTAGTTGTGTTTTGGATTTCCTGTGAGGCTGGTACGTATGTGAGGACTCTGTGTGTCCATTTGGGTTTGATTCTTGGTGTGGGAAGCCATATGCAAGAGCTTAGAAGGGTTCGTTCGGGTATTTCAGGTGAGAAAGATAATATGGTGTCTATGCATGATGTGTTGGATGCTCAATGGGTTTATGATAACTATAGAGATGAGAGTTATTTGAGAAGGGTTATCATGCCTTTAGAAGTGTTACTAACAAGTTATAAGAGACTGGTTGTGAAGGATTCTGCTGTTAATGCTATCTGTTATGGTGCAAAGCTGATGATTCCTGGGTTACTGAGATTTGAGAATGATATTGATGTTGGGGAAGAAGTGGTGCTTATGACTACCAAAGGTGAAGCCATTGCCTTGGGAATTGCAGATATGACTACTGCTGTAATGGCTACTTGTGATCATGGTGTAGTAGCAAAGATCAAAAGGGTGGTTATGGATAGGGATACCTATCCAAGGAAATGGGGCTTAGGACCGAGAGCAGGTATGAAGAAGAAGTTGATTGCAGAAGGTAAACTAGATAAGCGTGGTAAGCCAAATGAGAATACTCCTCAAGAGTGGCTGAGGAATGTAGTTTTACCAACTGGTGGCGATTCTATCATCGCCAGTATGCATGCCTCATCCGAACCAAAGGAGGATGGACAAGAGCGGAAAAGAAAAATAGTTGAAAGCACTGATAGTCCTGCTCCTGTACCCACTAAGAAGGCTAGAACTGAAGAAGTTGAAGAAGCTGAAAAGGAGGAAAAAGTGAAGATCAAGAAGGTAAAAGAGGATGTAGTGGAGATTGAAGTTGATAAGAAAGAGAAGAAGAAGAAGAAGAAGGATAAAGATGCTGATGAAGCAGAAGCTGGTTCACCGGAAGTGGAGAAATCTGAGAAGAAGAAAAAGAAGCACAAAGAAAAGACAGAAGCTGCTTCACCTGATGTAGAGAAGTCTGAGAAGAAGAAAAAGAAGAAGGACAAAGAAGTTGAAAATAATGCTGGTGAGTTGCCGACAGACATCAATGGAAAGGCTGATGATGATGATGATGGTCGAAGTGAGAAGAAGAAGAAGAAGAAGCACAAGAAGAAAAATGAAGATGCGGAGGAATAA 1749 0.4448 MSELEASRSDKKKKKHRNKDETPDLQDSDFLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPIPSGFSPLKRPLAEYIKYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVGKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDKHLVVFWISCEAGTYVRTLCVHLGLILGVGSHMQELRRVRSGISGEKDNMVSMHDVLDAQWVYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIADMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRAGMKKKLIAEGKLDKRGKPNENTPQEWLRNVVLPTGGDSIIASMHASSEPKEDGQERKRKIVESTDSPAPVPTKKARTEEVEEAEKEEKVKIKKVKEDVVEIEVDKKEKKKKKKDKDADEAEAGSPEVEKSEKKKKKHKEKTEAASPDVEKSEKKKKKKDKEVENNAGELPTDINGKADDDDDGRSEKKKKKKHKKKNEDAEE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0543 582 MobiDBLite consensus disorder prediction 423 582 - -
Enph4g0543 582 Gene3D Pseudouridine synthase 76 282 - -
Enph4g0543 582 FunFam H/ACA ribonucleoprotein complex subunit CBF5 76 282 - -
Enph4g0543 582 ProSiteProfiles PUA domain profile. 290 365 - -
Enph4g0543 582 Coils Coil 457 503 - -
Enph4g0543 582 PANTHER CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 8 570 IPR004802 GO:0006396
Enph4g0543 582 MobiDBLite consensus disorder prediction 1 29 - -
Enph4g0543 582 SMART DKCLD_2 42 100 IPR012960 -
Enph4g0543 582 Pfam PUA domain 291 363 IPR002478 GO:0003723
Enph4g0543 582 CDD PseudoU_synth_hDyskerin 82 264 - -
Enph4g0543 582 NCBIfam uncharacterized domain 2 286 362 IPR004521 GO:0003723
Enph4g0543 582 CDD PUA_Cbf5 289 363 - -
Enph4g0543 582 Gene3D PUA domain 43 374 IPR036974 GO:0003723
Enph4g0543 582 SMART pua_5 291 365 IPR002478 GO:0003723
Enph4g0543 582 MobiDBLite consensus disorder prediction 553 567 - -
Enph4g0543 582 SUPERFAMILY Pseudouridine synthase 43 288 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph4g0543 582 SUPERFAMILY PUA domain-like 290 371 IPR015947 -
Enph4g0543 582 Pfam TruB family pseudouridylate synthase (N terminal domain) 104 220 IPR002501 GO:0006396
Enph4g0543 582 MobiDBLite consensus disorder prediction 1 27 - -
Enph4g0543 582 Coils Coil 563 582 - -
Enph4g0543 582 NCBIfam RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 50 375 IPR004802 GO:0006396
Enph4g0543 582 Pfam DKCLD (NUC011) domain 43 100 IPR012960 -
Enph4g0543 582 Pfam tRNA pseudouridylate synthase B C-terminal domain 221 287 IPR032819 -
Enph4g0543 582 MobiDBLite consensus disorder prediction 428 443 - -
Enph4g0543 582 MobiDBLite consensus disorder prediction 452 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0543 Enph-Chr4 19168330 19170078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0543 1 530 NAC Transcription Factor Family AT3G57150 77.095 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0543 K11131 - qsu:111999229 807.749