LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0537	ATGGATGTCGGCGAAGATATTACCGATCCAAGTAACTGGGAAAAGCCTATGGCGAGTTTTCTCATACGCAATCACTCGGACCAGCTCCGCTGCATTGCTTCCTCCTCAGATTCCAAGCTTCATTATCCTCTCTTCGTCGATTTTGCAGAGTTGATGGATGATGACCCTCACCTCGCCCACCTCATCTTTACCGAACCCGCTACATATTTGCAAATATTCGACCAGGCTGCTGTTTGGGCTCATAGGGAAATTGACTTGGATTTGTATGCTGTGGTATGTAGAAAATCATATTGGGAGATTCGGGAGCAGACAAGAAAGGGTTTTGAAAAAACGATTCATGTCCGCATCAATACAAGTGGCTCTCCACTTGAATGCCCTGAAACTTTTCCAAGCATAGGAGGTATTAGAGTGAAGCACCGGGGGATTCTTCTAACTCTGAAAGGGACAGTAATCAGGTCAGGAGCAATAAAGATGCATGAAGGAGAGAGGGAGTACATGTGCCTAAAGTGCAAGAAGAGCTTCCTAGTTTACCCTCAAGTGGAAGCACGAAACTCCATAACACTACCTTCAATTTGCCAAGTTCAGGGGTCTAAGCCCTGTGGAGGTACAAAATTCCAGTATGTAGATGATACTATAGTATGCCATGATTATCAAGAGATAAAAATCCAAGAAAGCACACAGGTTCTTGGTGTTGGGGTGATTCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGACATTGTTAAAGCTGGAGACGATGTAATTGTTAGTGGGGTATTAACTGCGAAATGGTCTTCAGAAGTGAAAGATGTGCGATGTGACCTTGATCCTGTACTAATAGCCAACCATATAAGGAGAACAAATGAATTGAAGTCAGAAATTGATATTCCTGGTGATGTTATTATGAAATTCAAACAGTTCTGGGTCCAGTTTAAAGATTGTCCTCTGAAAGGGAGGAATGCTATTCTACGAGGAATTTGCCCACAAGTATTTGGACTTTTCACTGTCAAGCTGGCAGTTGCATTAACACTTATTGGAGGTGTGCAACATGTCCATACATCTGGAACAAAGGTACGAGGGGAACCCCACTTACTCTTGGTTGGTGATCCTGGCACAGGAAAATCACAGTTTTTGAAATTTGCTGCAAAATTGAGCAATAGATCTGTAGTTACCACTGGTATGGGAAGCACGAGTGCAGGATTGACTGTTACTGCAGTGAGGGATGGAGGAGAATGGATGTTGGAAGCTGGAGCCCTTGTTCTGGCAGATGGTGGGTTGTGTTGCATAGATGAATTTGACAGTATGAGGGAACATGACAGAGCAACCATACATGAAGCCATGGAGCAGCAGACCATAAGTGTTGCCAAGGCTGGCCTTGTAACAACACTCAGCACCAGAACAACAGTGTTTGGTGCTACCAATCCTAAGGGACATTATGATCCTGATCAGCCTCTATCTGTCAACACAACACTCTCTGGTCCTTTATTAAGCAGGTTTGATATAGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCAGTGGTTTCATCTCATATTCTTAATGAGGCAGAACCAGATAAAACGAGGCAAGATGAAGATCTAGCAAATATCTGGCCTCTTCCTACACTCAAGAGGTATATTCACTACATTAAAGAAAGCTTCAAACCAGTTCTTACAAGAGAGGCCGAGACAGTCATCTCCAGTTATTATCAACTGCAAAGGAAATCTGGAACTCATAATGCAGCAAGGACAACTGTTCGCATGCTGGAAAGTTTGGTTCGCCTAGCTCAAGCTCATGCAAGGTTGATGTTCAGAAATGAGGTGACTCGATTAGATGCCATCACAGCCATTTTATGCATAGAATCTTCAATGACTACCTCTGCTATAGTGGATTGCATTGGTAATGCTCTGCATTCCAATTTTAAGGAAAACCCTGACGAGGAATATACTAAACAAGAGAGGATGATCCTAGAAAAATTGGGAATTGATGAATTCTCTGATATGAACACCATTGAAGGCTGA	2034	0.4292	MDVGEDITDPSNWEKPMASFLIRNHSDQLRCIASSSDSKLHYPLFVDFAELMDDDPHLAHLIFTEPATYLQIFDQAAVWAHREIDLDLYAVVCRKSYWEIREQTRKGFEKTIHVRINTSGSPLECPETFPSIGGIRVKHRGILLTLKGTVIRSGAIKMHEGEREYMCLKCKKSFLVYPQVEARNSITLPSICQVQGSKPCGGTKFQYVDDTIVCHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVIVSGVLTAKWSSEVKDVRCDLDPVLIANHIRRTNELKSEIDIPGDVIMKFKQFWVQFKDCPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVHTSGTKVRGEPHLLLVGDPGTGKSQFLKFAAKLSNRSVVTTGMGSTSAGLTVTAVRDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGHYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILNEAEPDKTRQDEDLANIWPLPTLKRYIHYIKESFKPVLTREAETVISSYYQLQRKSGTHNAARTTVRMLESLVRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFKENPDEEYTKQERMILEKLGIDEFSDMNTIEG	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph4g0537	677	PANTHER	DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER	43	660	IPR031327	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	Gene3D	-	159	215	-	-
	Enph4g0537	677	FunFam	Probable DNA helicase MCM9	298	632	-	-
	Enph4g0537	677	Pfam	MCM AAA-lid domain	546	627	IPR041562	-
	Enph4g0537	677	SUPERFAMILY	Nucleic acid-binding proteins	41	271	IPR012340	-
	Enph4g0537	677	SMART	AAA_5	362	511	IPR003593	GO:0016887
	Enph4g0537	677	CDD	MCM9	323	627	-	-
	Enph4g0537	677	PRINTS	Mini-chromosome maintenance (MCM) protein family signature	447	460	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	PRINTS	Mini-chromosome maintenance (MCM) protein family signature	419	433	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	PRINTS	Mini-chromosome maintenance (MCM) protein family signature	361	376	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	PRINTS	Mini-chromosome maintenance (MCM) protein family signature	497	505	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	SMART	mcm	128	629	IPR031327	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	Gene3D	-	135	264	IPR012340	-
	Enph4g0537	677	Pfam	MCM P-loop domain	322	525	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	Gene3D	-	315	633	IPR027417	-
	Enph4g0537	677	ProSiteProfiles	MCM family domain profile.	320	523	IPR001208	GO:0003677\|GO:0005524\|GO:0032508
	Enph4g0537	677	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	330	637	IPR027417	-
	Enph4g0537	677	Pfam	MCM OB domain	135	263	IPR033762	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0537	Enph-Chr4	19073403	19087219	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0537	5	652	Core DNA Replication Machinery Family	AT2G14050	74.000	0.0	984

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph4g0537	K10738		-	gmx:100776255	1085.86