LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0492	ATGGCGGATTACAGAGTGAACCTTCCACCTGGGTTCAGATTCTATCCCACAGATGAAGAACTTATAGTCCATTTCCTTCACAGAAAGGCTTCACTTCTACCTTGCCACCCTGACGTCATCCCTGACCTCGAGCTCTGTCCCTACGACCCATGGGACCTTGAAGGGAAAGCTCTGGGGGAGGGAAACCAGTGGTACTACTATAGCAGAAGGACTCAGAACAGGGTTACAGTGAATGGGTTCTGGAAAGCAATGGGGATGGAAGAGGCAGTGATTGCAGAAAGCAGTAATAAGAGAGTCGGAATGAAGAAGTATTTTGATTGCAGTAAATGGGTGATTTGTCGAGTTTATGAACGTGACAGTGATGATGAGGATGGTGGTGATAATGGAATAGAGCTGTCTTGTCTGGATGAGGTGTTCTTGTCCATGGATGATCTTGAAGAAATAAGCTTACCAAATTATTAG	462	0.4545	MADYRVNLPPGFRFYPTDEELIVHFLHRKASLLPCHPDVIPDLELCPYDPWDLEGKALGEGNQWYYYSRRTQNRVTVNGFWKAMGMEEAVIAESSNKRVGMKKYFDCSKWVICRVYERDSDDEDGGDNGIELSCLDEVFLSMDDLEEISLPNY	153

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph4g0492	153	ProSiteProfiles	NAC domain profile.	8	153	IPR003441	GO:0003677\|GO:0006355
	Enph4g0492	153	PANTHER	NAC TRANSCRIPTION FACTOR 56	8	105	-	-
	Enph4g0492	153	Pfam	No apical meristem (NAM) protein	9	106	IPR003441	GO:0003677\|GO:0006355
	Enph4g0492	153	SUPERFAMILY	NAC domain	5	116	IPR036093	GO:0003677\|GO:0006355
	Enph4g0492	153	Gene3D	NAC domain	17	109	IPR036093	GO:0003677\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0492	Enph-Chr4	18229634	18230457	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0492	7	103	NAC Transcription Factor Family	AT1G69490	43.810	1.71e-24	93.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Enph4g0492		NAM	2.8e-21	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph4g0492	-		-	gmx:100788893	245.358

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph4g0492	4	18229634	18230457	Enph4g0492	4	18229634	18230457	CCT
	Enph4g0492	4	18229634	18230457	Enph4g0492	4	18229634	18230457	ECH