Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0424 ATGTCTTTCCGAAGTATAGTTCGTGATGTTAGAGACAGCTTAGGGAGCTTATCCAGACGGAGTTTTGATGTCCGGCTGGCTAGCCATCACAGAGGAAAATCTCATATCTCAATATATGATCAGCCAGAAGTAATTGAAAATAGTTGCTGGGCTAGCTTGCCCCCTGAATTGTTACATGATATCATTAGAAGGCTCGAAGAGAGTGAGGGTACATGGCCTGCTCGAAAGAATGTTGTTGCATGTTCTGCAGTATGCAGGTCTTGGAGAACTATGTGCAAGGAAATTGTTAAGAATCCAGAATTTTGTGGCAAGCTTACTTTCCCTGTATCCCTGAAGCAGCCAGGAGCTCGAGATGGAACCATTCAGTGTTTTATCAAAAGGGATAAATCTAATCTAACATACCGCCTTTATCTTTGTCTAAACCCTACTTTGTTAGTTGAAAATGGAAAATTCCTCCTTTCTGCTAAGAGGACAAGAAGAACAACTTACACAGAGTATATTATATCTATCGATGCTGACAATATCTCTAGATCAAGTAATTCTTACATCGGAAAGTTAAGATCGAACTTTCTTGGTACCAAATTTATAATATATGATACACAGCCTCCATATAATTCTTCCCATATACCACCTCCCGGGAAAACAAGCCGAAGGTTTTATTCAAAGAAAGTCTCACCAAAGGTCCCATCTGGAAGTTACAACATAGCTCAAGTAACATATGAATTAAATGTGCTTGGTACACGTGGCCCGAGGAAGATGCACTGTGTTATGCATTCGATACCAGTCTCAGCACTCAATGCTGGTGGAACTGTCCCTGGCCAACCCGAGCTTCTTCCTCGCCCCCTGGAAGACTCATTCCGGAGCATATCCTTTTCAAAATCTCTAGATCGCTCTATCGAGTTCAGCAGCTCGAGATTTTCCGAGTTTGGGGAAGGCAGCTGCAATGAGGATGAGGCTGGGAAGGTGAGGCCCTTGGTTCTGAAAAACAAATCTCCAAGATGGCATGAACAACTGCAATGTTGGTGCCTTAATTTTCGAGGCCGGGTTACAGTTGCATCGGTTAAAAACTTTCAGTTGATTGCTGCTACCCAGCCAGCAGCTGGTGCTCCTACACCGTCTCAGCCAGCACCATCTGAGCATGATAAGGTAATTCTGCAGTTTGGTAAAGTAGGGAAAGACATGTTCACCATGGATTATCGGTACCCTCTCTCGGCTTTCCAGGCTTTTGCCATATGCTTGAGCAGCTTTGACACCAAACTGGCTTGTGAATAA 1272 0.4363 MSFRSIVRDVRDSLGSLSRRSFDVRLASHHRGKSHISIYDQPEVIENSCWASLPPELLHDIIRRLEESEGTWPARKNVVACSAVCRSWRTMCKEIVKNPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYRLYLCLNPTLLVENGKFLLSAKRTRRTTYTEYIISIDADNISRSSNSYIGKLRSNFLGTKFIIYDTQPPYNSSHIPPPGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCVMHSIPVSALNAGGTVPGQPELLPRPLEDSFRSISFSKSLDRSIEFSSSRFSEFGEGSCNEDEAGKVRPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPAPSEHDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0424 423 CDD F-box_AtTLP-like 50 94 - -
Enph4g0424 423 ProSitePatterns Tub family signature 1. 345 358 IPR018066 -
Enph4g0424 423 Gene3D - 43 98 - -
Enph4g0424 423 FunFam Tubby-like F-box protein 107 423 - -
Enph4g0424 423 Pfam F-box domain 50 98 IPR001810 GO:0005515
Enph4g0424 423 Pfam Tub family 111 418 IPR000007 -
Enph4g0424 423 ProSitePatterns Tub family signature 2. 408 423 IPR018066 -
Enph4g0424 423 SUPERFAMILY F-box domain 43 93 IPR036047 GO:0005515
Enph4g0424 423 SUPERFAMILY Tubby C-terminal domain-like 99 423 IPR025659 -
Enph4g0424 423 PANTHER TUBBY-RELATED 27 421 - -
Enph4g0424 423 PRINTS Tubby superfamily signature 182 206 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 327 344 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 232 259 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 401 423 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 345 361 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 380 399 IPR000007 -
Enph4g0424 423 PRINTS Tubby superfamily signature 166 182 IPR000007 -
Enph4g0424 423 Gene3D Tubby Protein; Chain A 109 417 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0424 Enph-Chr4 16884581 16889399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0424 1 423 TUB Transcription Factor Family AT1G76900 68.113 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Enph4g0424 Tub 1.5e-116 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0424 K19600 - gmx:100814578 723.005