Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0396 ATGGCTTCTCATTCTCACTTATCCACCTCTATCCATTTCTTCAAGATCATCTTGAAAACCAATCTTGAAGCCATTACTATTCCAAACAAATTTACAGGCAGATATGGAAATGGTTTGCCAAACCCAGTGTTTCTGAAGCCTCCTGATGGTAAAGAATGGAAAGTGTGTTGGACAAAACGTGATAATCAGCTTTGGTTTCGAGAGGGGTGGAAGGAATTTGTTAGCTTTTACTCTCTGAATGAAGGGTATTTGGTTATGTTCAAATATGAAGGAACTTCTCAGTTTGATGTACACATATTTGACAAGAGTGCCTTAGAGATAGACTATCCTTTGTCTAAGGATACCTCTAGTCAAAAGGACAACTTTGATAATCTCAGTGATGATACAATTGAAATCATGGATGAGATGCCTCCAAACCGAAAGACTAGGCTTGAAACACCATTTTCGTCTTCAAGACATCATAAGAAAATGGGAAGTGCCACATTTGGAGATGTTGAGAAGAGAAACTCCAATCTGCAGAATTTGCATGCTGGTTTGAAAACTCAAGGCGAGCAATTTCAGGGGACAGAGTATCAGAAATCAACCAATGCTGAATTGAGATTTTCTGAGCAGGAATCTGAAGAAGACATAGGAGCAAGAACTTTTACCAAGAGTAGATGCCTGAATTCTGAGCACAGAAGGAAGAGAGCATTAACTAATTTGGAAAAGATCAGAGCTTTTGAGAGTGCCAGTTTGTTCAAATCTGAAAATCCCTTTTTCATGGTAGTCATGAAATCTGCATACGTCAGCCGTAAATTTTACTTGGTAATGCCAACAAAATTCTCTAAAAAATATTTGAAGAATGAGTGTGTTTTGGAACTTCATACCTTGGATGGGAGAACTTGGTCCACGACGTATAAGATTCCCAGAATCACATATGGCTGGGAGAAATTTGTTATGGATAATAGTTTGAGAGTGGGCCAGGTTTGTGTTTTTGAAATGATTGGTCAATCATTCAGAGTACATATTTTTGGAGATGAAGAAGAAGAGGGAAATCTGAGAGTCAATCCTTTAAAGAATGAGCAGATGAGCAGTATGCAACATTCTTCTCTTGAAAATGCTATCTCTTTCAAATCTAAAAATCCCCATTTTATCTTGAAGATGACATACTTTTACATTTTTGGCACATCAAACTTGCATGTGCCGATAACATTCGCAGAAACACATCTTGTTAACCGAACTACAAGTGTCAATCTTATCGTACAAGATGTAGCTTGGCCTGTTGCATATGAATTCAGAACAACTTCTCAAGGAAATCAAATTCATGAATTTTCTCTAGGATGGAAGCGATTTTGCAGGGATAATAACTTGGAAGTAGATGATGTTTGTGTCTTTGAGCTCATTATGAAAATCAAATTCGCATTTCGAGTGACAATTGTTCGAGCCGCTGAACACCCAGTTCATTCAACCCACTGA 1455 0.3787 MASHSHLSTSIHFFKIILKTNLEAITIPNKFTGRYGNGLPNPVFLKPPDGKEWKVCWTKRDNQLWFREGWKEFVSFYSLNEGYLVMFKYEGTSQFDVHIFDKSALEIDYPLSKDTSSQKDNFDNLSDDTIEIMDEMPPNRKTRLETPFSSSRHHKKMGSATFGDVEKRNSNLQNLHAGLKTQGEQFQGTEYQKSTNAELRFSEQESEEDIGARTFTKSRCLNSEHRRKRALTNLEKIRAFESASLFKSENPFFMVVMKSAYVSRKFYLVMPTKFSKKYLKNECVLELHTLDGRTWSTTYKIPRITYGWEKFVMDNSLRVGQVCVFEMIGQSFRVHIFGDEEEEGNLRVNPLKNEQMSSMQHSSLENAISFKSKNPHFILKMTYFYIFGTSNLHVPITFAETHLVNRTTSVNLIVQDVAWPVAYEFRTTSQGNQIHEFSLGWKRFCRDNNLEVDDVCVFELIMKIKFAFRVTIVRAAEHPVHSTH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0396 484 CDD B3_DNA 375 474 IPR003340 GO:0003677
Enph4g0396 484 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Enph4g0396 484 ProSiteProfiles B3 DNA-binding domain profile. 377 476 IPR003340 GO:0003677
Enph4g0396 484 SMART B3_2 383 476 IPR003340 GO:0003677
Enph4g0396 484 SMART B3_2 253 340 IPR003340 GO:0003677
Enph4g0396 484 SMART B3_2 13 103 IPR003340 GO:0003677
Enph4g0396 484 SUPERFAMILY DNA-binding pseudobarrel domain 10 103 IPR015300 -
Enph4g0396 484 CDD B3_DNA 251 337 IPR003340 GO:0003677
Enph4g0396 484 ProSiteProfiles B3 DNA-binding domain profile. 253 340 IPR003340 GO:0003677
Enph4g0396 484 Pfam B3 DNA binding domain 253 337 IPR003340 GO:0003677
Enph4g0396 484 Pfam B3 DNA binding domain 21 102 IPR003340 GO:0003677
Enph4g0396 484 Pfam B3 DNA binding domain 380 475 IPR003340 GO:0003677
Enph4g0396 484 SUPERFAMILY DNA-binding pseudobarrel domain 372 477 IPR015300 -
Enph4g0396 484 CDD B3_DNA 12 101 IPR003340 GO:0003677
Enph4g0396 484 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 355 477 IPR044837 -
Enph4g0396 484 Gene3D - 356 478 IPR015300 -
Enph4g0396 484 Gene3D - 230 341 IPR015300 -
Enph4g0396 484 Gene3D - 6 104 IPR015300 -
Enph4g0396 484 SUPERFAMILY DNA-binding pseudobarrel domain 248 337 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0396 Enph-Chr4 15557333 15562703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0396 360 474 B3 DNA Binding Superfamily AT3G18990 28.696 2.03e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Enph4g0396 B3 7.9e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0396 - - pcin:129304822 585.874